Pseudomonas putida KG-4, V520_RS09365
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KG-4 contig00005, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTTCCAGCGGCCCGTTCCCCTTCCCCTTCGACGAACCGGGCAAGTACGAGATCAGCAAGCACGCCAACACCTATGGCCCCAAGGACGGTCATGCCTTCAC CGCCCCGGTGGGCAGCTACCCGCCCAATGCCTTCGGCATGTACGACATGCACGGCAACGTCTACGAATGGGTCGCCGACTGCTACCACGACAGCTACGAA GGCGCCCCCACCGACGGCAGCGCCTGGATCCAGGACCCCAAGTGCATTCGCGCGCACATGCGCGGCAACGACTGGGGCGAGCCGCCGATCTTCTCCCGCT CGGCCAACCGCAACGACCGCCTCAAGACCACCCGGGGGGACTTCCTCGGCTTTCGCGTAGCACGCGAACTGTGAAGTTGTGACGCGGTTAACGCAGCACC GGCCAAAAAAATCGCCAATAAGAATCGTTCCGGTTTTTAACAGGTGCTGCGTCCTATAGCTGACATAGAAAAAAACCCTCTGCCAACGAGACCGCAATAG
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| DNA Sequence for Gene |
>V520_RS09365
ATGTCCAAGTCCCTCCCCGGCCCGCTCAACCCGCTTGCCAAAGCATTACTGATCCGTCATTCCCTTCGTCCCCAGCGCGCGTTCACACGCATCGGCCTGG GCCTGGCGATATCCGCTGCGATGGTTGCCCAGGTGCAGGCACAGGAGTGGACCCTGGATATTCCTGCGCAGTCGATGAATTCGGCGTTGCAGGCACTGGC CAGGCAGACCGATACCCAGTTGCTGTACAGCCCGGAAGATATCGGTGGCCTGCGCTCCTCTGCACTCAAAGGGCGCCACGACCTAGCTTCGTCCCTGCGC ATCCTGCTGGGCGGCAGCGGGCTGCGTTATCAGATCGACGGCAACACCGTGACGGTAACAGCGAGTTCAACCGCAAAGGACGGTCAGGTCGAGCTTTCGG CGACCAACGTCAATAGCGTGGGCCTGGGGGCCACTACCGAAGGCACGGGTTCCTACACTACCGGCGTGACCAGCACGGCCACCCGCATGAACCTGTCGAT ACGCGAAACACCACAAAGCATCAGCGTCATCACCCGTCAGCAAATGGACGACCAGCACCTGGCAACCATTACCGACGTGCTGAAGCAGAACCCGGGCATC ACCATGTCTCAGGACGGTGGCGAGCGCTTTCACATCTATTCGCGCGGCTCGGAAATCAGTACCTACCAGCTCGATGGCGTGAACACCACGCAAGACTACC TGACGCGCAACATGCCCAACACCCTGATGGACATGGCCATGTTCGACCGCATCGAGATCGTCCGCGGTGCCACTGGCCTGATGACCGGTGCGGGCGAGCC CAACGGTGTGGTCAACATGGTACGCAAGCGCCCCACGCGAGAATTCCAGTCGTATGTGCAGGCCGGTGTGGGCTCGTGGGACTACTATCGCACCGAGGCC GACGTTTCCGGCCCGCTGATCGAAAGCGGCAAGCTGCGTGGCCGCCTGGTGGCCGCCAAGCAGAGCAACCAGAGCTACATGGACTGGTACAGCCAGGACC GTGACTTGGTCTACGGCGTGCTCGAAGCAGACCTGACCGATACCACCACCGTGCGCTTCGGCATGGACTACCAGACCTACGACGCCAATGGCGCGCCAGG TGTGCCGCTGTTTTTCAGCAATGGCCAGCCCACCAACTTCTCCCGCTCGACCAGTTCCGGGCCGCGCTGGATGTATGAAGACTACACCACCAAGAACTAC TCCTTCGGCCTGGATCAGGAGCTTGGCAATGGTTGGCAGTTGAAAATGGCCGGCAACTACATGGATGTCGATCGCGACTCGCTGTCGGCGTTCTATCGCA CCGGTGCCGGGGTCTCTACCCTCGATCAAGCCACCGGCAACGCCAAGTCCGACCTGCTGCAAGTCGATGCCCATCAGGTTCAGCGGGGCATGAACATCAC GCTGCAGGGGCCTTTCGAGCTGTTTGGCCAGACCCACGAACTGGTTACCGGCTTCGACTACATGGATTACGAGAACAACCACTTCACCGGAACAGCTGGG GAAGCCACATTCAACTTCTACACCTGGGGCAATCGCATACCGCAACCTGGCAACTATTCGCCACTGCTGGATTATGATCTGACTATCCGCCAGACCGGCT ACTTCATTGCCACCCGGTTCAACCTCACCGACGACCTGCACATGATTCTCGGTGCCCGTACCACCAATTACCGTTCGGACTCGAACCAGGTGGTATTGAC CACTGGCAACGGCAACCCCACGCAACTGAATGAGCGCGGAGAGGTAACACCGTACGCCGGCCTGATCTACGACCTGACCGATGAGCAATCGGTGTACGCC AGCTACACCGATATCTTCAAGCCACAGACCAGCCGCGACCGTACCGGCAAGGTGCTGGACCCTGTAATCGGGCAGAACTATGAAATGGGCTGGAAGGGTG AATTCTACGACGGCCGCCTGAACGCCAACGCGGCGATCTACCTCATCAAGCGCGACAACCTTGCAGAGGAAGACACCGGCTTCAGCGTACCGGGCGTGCC TAACTCCACCGCTTACCGCGCGGTCAGCGGCGCCGAAACCAAAGGTATTGATCTTGAACTGTCCGGCGAAGTGGCTCGCGGGCTGGAAGTTCATACCGGT TACAGCCACTCCCGCACGGAAGATGCCAATGGCACTCGCCTGACATCTCAACTGCCGCTGGATACATTCCGCCTGTGGACTACCTACCGCCTGCCCGGCG AATGGGAGCGCCTGACTGTTGGTGGTGGGGTCAACTGGAACTCCCAGCAATCCCTGGCCACCCGCTACAACACGCGCATCACCCAGGAAGACTACGCCGT GGCCAGCCTGATGGCCCGCTACAAGATCAGCGAGCACCTGGCCGCCACGCTGAACGTGGACAACCTGTTCGACAAAAAGTACTACGCAGGCCTGGCCGGC AACTATGGCCACTATGGCGCGCCGAGAAACGCGACGCTGAACCTGCGCTACGATTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAGCAGAACGAAAAAAGGCGACCCTGGAGGTCGCCTTTTTCATGCCTGCATGGTCTTCGCATCGGTACGCGGTCCGTTGCAGGAGCGGCCTTGTGTCGC GAAAGGGCCGCAACGCGGCCCCGGCGGCTCAGCAGTTATGCAGGAATTGCCGGGGCTGCCTTGCAGCCCTTTCGCGACACAAGGCCGCTCCTACAAAGAG TGAGCAGGTTTACGGGCTGATCGTATCTGCCAGCAACAGCCTGGCGATCATCCCCTCAAGGACATCCACCTGTTCGAGGATGTCATAGTGCCCGGCATCA ACAGCAATGTCCTGGCAGCTACCCGAAATGCCACCCGCGTGCGCGCCCTCCCCCGCCCACCAGCAACTTGCCGCTGACTCGGTAGACGGTAGCTGGCGCA ATTGACGCGAAAGCGCCTTGAGTTTCATTGCCACAACAAAGGTCTGCGCCAGATCAGCGTTGCCGATTTCGGCATAGGCCGACTGTGCAGCCTGCGCGGC
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| Amino Acid Sequence |
>ferric-pseudobactin 358 receptor
MSKSLPGPLNPLAKALLIRHSLRPQRAFTRIGLGLAISAAMVAQVQAQEWTLDIPAQSMNSALQALARQTDTQLLYSPEDIGGLRSSALKGRHDLASSLR ILLGGSGLRYQIDGNTVTVTASSTAKDGQVELSATNVNSVGLGATTEGTGSYTTGVTSTATRMNLSIRETPQSISVITRQQMDDQHLATITDVLKQNPGI TMSQDGGERFHIYSRGSEISTYQLDGVNTTQDYLTRNMPNTLMDMAMFDRIEIVRGATGLMTGAGEPNGVVNMVRKRPTREFQSYVQAGVGSWDYYRTEA DVSGPLIESGKLRGRLVAAKQSNQSYMDWYSQDRDLVYGVLEADLTDTTTVRFGMDYQTYDANGAPGVPLFFSNGQPTNFSRSTSSGPRWMYEDYTTKNY SFGLDQELGNGWQLKMAGNYMDVDRDSLSAFYRTGAGVSTLDQATGNAKSDLLQVDAHQVQRGMNITLQGPFELFGQTHELVTGFDYMDYENNHFTGTAG EATFNFYTWGNRIPQPGNYSPLLDYDLTIRQTGYFIATRFNLTDDLHMILGARTTNYRSDSNQVVLTTGNGNPTQLNERGEVTPYAGLIYDLTDEQSVYA SYTDIFKPQTSRDRTGKVLDPVIGQNYEMGWKGEFYDGRLNANAAIYLIKRDNLAEEDTGFSVPGVPNSTAYRAVSGAETKGIDLELSGEVARGLEVHTG YSHSRTEDANGTRLTSQLPLDTFRLWTTYRLPGEWERLTVGGGVNWNSQQSLATRYNTRITQEDYAVASLMARYKISEHLAATLNVDNLFDKKYYAGLAG NYGHYGAPRNATLNLRYDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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