Strain | Pseudomonas putida KG-4 contig00005, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGTACCTGTCGCGCCACCTGCACGACGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATCATCGCCAGCGACGTCGCAAACTCCCTGG AAAAACGCCTGGCCGCCCGCCCGGCGCACATCGAACGCCTGCAGCAGCTGAAGGCGGAGGGCCGCGTGGTACTGGCCGGCCCGCACCCGGCGATCGACAG CAACGACCCGGGCGAAGCGGGTTTCAGCGGTAGCCTGATCGTTGCCGAGTTCGACTCCCTGGCCGCGGCGCAGGCCTGGGCCGATGCCGACCCTTACATT GCCGCGGGCGTGTACGACAAGGTAGTGGTCAAGCCGTTCAAGCAAGTGCTGCCTTGACCTGAGACCGCGCGGCCTTCTTCGCGGCTAAACCCGCGAAGAA GGCCGCGCGGTACCGGCAGTTATACTGTTGCCATCAGTCTGCGGTATCTTTGCCACTGGCGGGCCGAATAGCCGCCGTCAATGGTTGAATTGAGTGAGTC
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DNA Sequence for Gene |
>V520_RS09035
ATGAGCGAGCTGTTACTGATAGATGATGACCAGGAGCTGTGCGAGCTGCTCGGCAGCTGGCTGACCCAGGAAGGGTTTACCGTGCGCGCCTGCCACGATG GCCAGAGCGCACGTCATGCCTTGGCCACGCATGCCCCGGCGGCCGTGGTGCTGGACGTGATGCTGCCCGACGGCAGTGGCCTGGAACTGCTCAAGCAGTT GCGCAGCGAGCATGCCGAACTGCCGGTGCTGATGCTCTCGGCCCGCGGCGAGCCGCTGGACCGCATCCTCGGCCTGGAACTGGGCGCTGACGACTACCTA GCCAAACCCTGCGACCCGCGTGAACTCACCGCTCGCCTGCGTGCCGTGCTGCGCCGCAGCCACCCCACCGCCACCACCAGCCAGGTGGAACTGGGCGACC TGGTCTACAGCCCTGCCCGTGGCGTGGCCAGTATCGATGGCCGCGAAATGACCCTGACCCTGTCCGAAAGCCGCATTCTCGAAGCGCTGCTGCGCCAACC CGGCGAGCCGCTGGACAAGCAGGAACTGGCGCAGATCGGCCTGGGCCGCAAGCTGACCCTGTACGACCGCAGCCTGGACATGCACGTCAGCAACCTGCGC AAGAAGATCGGCCCCCACGCCGATGGCCGGCCGCGCATCGTCGCCCTGCGCAGCCGTGGCTATTACTACTGCCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACATCTTTACCGAGCCTTTACCATCCACTGACCGCGCTTGACGGTTATCTCCCTAGACTGTGCTCATCCGGTAACCACCGGCCCATGAAAGGAGAGACAC CATGCGCAAGACCCTTATCGCCCTGATGTTCGCCGCCGCCCTGCCGACCGTGGCCATGGCCATGCCTGAAGGCGGCCCGCGCCACGACGGCCCACATCAT CGCGGTGATGCGCCTTTCCACCAGCTGGACCTGAGCCGTGACCAGCGCCAGCAGATCGGCAAGCTGATGGGCGAACAGATGAAACAGCGCCGCGACATTA CCGAGCGCTACCTGTCCAAACTGCCGGCCGCCGACCAGAAGGCGATGAAGGACGAACTGCAGGCCAACCGCGACAAGACTGACAGCGCGGTCCGTGCCCT GCTCAAGCCTGAGCAGCAGAAGAAGTTCGACGAACTGCAGAAGGAACGCGCCGCACAGAAAGCCGAGTGGCAGGAGTTCCAGGCCTGGAAAGCTGAAAAA
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Amino Acid Sequence |
>chemotaxis protein CheY
MSELLLIDDDQELCELLGSWLTQEGFTVRACHDGQSARHALATHAPAAVVLDVMLPDGSGLELLKQLRSEHAELPVLMLSARGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSHPTATTSQVELGDLVYSPARGVASIDGREMTLTLSESRILEALLRQPGEPLDKQELAQIGLGRKLTLYDRSLDMHVSNLR KKIGPHADGRPRIVALRSRGYYYCL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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