Sequence View: V520_RS08000, Pseudomonas putida KG-4

Pseudomonas putida KG-4, V520_RS08000

Cytoplasmic

Cytoplasmic Membrane

Periplasmic

Outer Membrane

Extracellular

Unknown

Sequence Data

Strain	Pseudomonas putida KG-4 contig00004, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene	CTGCTGTGGGTACTGCTTATCTATTTCGGCACCGTCGGCTTGATGAACGCCCTCGGTGAAGCCCTGAACATGCCGGGCCTGGAGCTCAGCGCCTTCGCTG CGGGTGTGATCGCCCTGGGCCTGTGCTTCGGCGCCTACGCCACCGAAGTGTTCCGTGGCGCCATCCTGGCGATCCCCAAGGGCCACCGTGAAGCCGGCCT GGCGCTTGGCCTGTCCAAAGGCTGCATCCTGTCGCGGATCATCCTGCCTCAGATGTGGCGCATCGCCCTGCCCGGCCTTGGCAACCTGTTCATGATCCTG ATGAAGGACACCGCGCTGGTATCGGTAATCGGCCTGGAAGAAATCATGCGCCACGCACAAATCGGCGTGACCGTGACCAAAGAGCCGTTCACCTTCTACA TGGTCGCGGCCTGCATCTACCTGAGCCTGACTATCATCGCGATGACCGGAATGCACTTCATGGAAAAACGCGCCGCTCGCGGCTTTGCGAGGGCCGAATA BLASTN Search
DNA Sequence for Gene	>V520_RS08000 ATGAATTGGGAAGTCATCATCAAATGGCTGCCACGCCTGGCCCAGGGTGCGACCCTGACCCTGGAGCTGGTGGCCATCGCAGTGGTTGCCGGGTTGATCC TGGCCATTCCGCTGGGCATCGCCCGTTCCTCGCGCCACTGGTATGTGCGCGCGGTGCCGTTCAGCTACATCTTCTTCTTCCGTGGCACGCCGCTGCTGGT GCAGCTGTTCCTGGTCTACTACGGCCTGGCGCAGTTCGACGCGGTGCGTTCGAGTTCGCTGTGGCCGTACCTGCGCGACCCGTTCTGGTGCACCGTGCTG ACCATGACCCTGCACACTGCTGCCTACATCGCCGAGATCCTGCGCGGCGCGCTGCAGTCGATCCCCAAGGGTGAGATCGAGGCGGCGCGGGCGCTGGGCA TGTCGCGGGGCAAGACGCTGTTCTACATCATGCTGCCACGCGCCGCGCGCATCGGCCTGCCGGCGTACAGCAACGAAGTGATCCTGATGCTCAAGGCCAG TGCCCTGGCCAGTACCGTGACCCTGCTGGAATTGACCGGCATGGCCCGTACCATCATTGCCCGCACCTACCTGCCAGTAGAGATCTTCTTTGCCGCCGGG GTGTTCTACCTGGTGATCTCGTTCGTGCTGGTGCAGGGCTTCAAGCTGCTGGAGCGTTGGTTGCGCGTGGATGCCTGCCAGGGCCGCTGA BLASTN Search \| DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene	GACCTCACTGACTGCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCCAACCTTGAATGTGGCGCTATACCTGTGGGAGCGGGCGTGCCCGCGAAGAG GCCCTCGAACCCACCACACATCCTTGCCATGCCCAACCAACTCCACAGCCCCCACCTAAGCACCCGCTTCCAGGCCCTCGACCAGTTCCTGATCGAGCAC CAGCAGCTGTGGAAACCCCGCCCCTTCACCACCCTGCACCTGGCCTGGGAAACCGCCCACCCCGAGCTTGCCGCCCACCTGCGCCAATGCTCCCTGGCAG ACGCCGAAACCGACACCACCGCTGCCCCATTGCCCGCCCCGTTCCCGCAACTGGCCCAGCAAGCCCAACAGCTTTCGGCCCTCGGCAACCTGCCGGCGAC CGATCTACCCACCGCCGCGCACCGCCTAGACGTCGCCGTCCCCGGCCGCAAATGGCAGCAGATCGAAGCCTTCGCCAGCCACCTAGCCTTCCGCGAACAG BLASTN
Amino Acid Sequence	>polar amino acid ABC transporter inner membrane subunit MNWEVIIKWLPRLAQGATLTLELVAIAVVAGLILAIPLGIARSSRHWYVRAVPFSYIFFFRGTPLLVQLFLVYYGLAQFDAVRSSSLWPYLRDPFWCTVL TMTLHTAAYIAEILRGALQSIPKGEIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIARTYLPVEIFFAAG VFYLVISFVLVQGFKLLERWLRVDACQGR BLASTP \| DIAMOND BLASTP (DIAMOND is faster than BLASTP) Search for conserved domains in this protein at NCBI CDD site