Pseudomonas putida KG-4, V520_RS07765
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KG-4 contig00004, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCCTGGCGCCCAGGGCGGCCCGCTGATGCACGTGATCGCCGCCAAGGCCGTGTGCTTCAAGGAAGCACTGGAGCCTGAATTCAAAGCCTACCAGCAACA AGTGATCGAAAACGCCCAGGCCATGGCCCAGGTGTTCATCGACCGCGGCTACGATGTGGTTTCTGGCGGCACCGACAACCACCTGTTCCTGGTCAGCCTG ATCCGCCAGGGTCTCACCGGCAAAGATGCCGACGCCGCCCTGGGCCGCGCGCACATCACCGTCAACAAGAACGCCGTGCCGAATGACCCGCAGTCGCCAT TCGTCACCTCGGGCCTGCGTATCGGCACCCCGGCTGTCACCACCCGCGGCTTCAAGGTCGCTCAGTGCGTGGCCTTGGCCGGCTGGATCTGCGACATCCT CGACAACCTCGGTGACGCAGACGTCGAAGCCGATGTGGCGAAGAACGTCGCGGCCCTGTGCGCAGATTTCCCTGTTTACCGCTGAGTGGAGTCACACACC
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| DNA Sequence for Gene |
>V520_RS07765
ATGCAACGTTACTCGGGCTTCGGCCTTTTCAAGCACTCCCTCAGCCACCACGAGAACTGGCAGCGCATGTGGCGCACGCCAACCCCTAAAAAGGTCTACG ACGTGGTTATCGTCGGCGGTGGCGGCCATGGCCTGGCCACGGCCTACTACCTGGCCAAGGAACACGGCATCACCAACGTTGCCGTGATCGAGAAGGGCTA CCTGGGCGGCGGCAACACTGCCCGTAACACCACTATCGTGCGTTCCAACTACCTGTGGGATGAGTCGGCGCACCTGTACGAACACGCCATGAAGCTGTGG GAGGGCCTGTCCCAGGACCTCAACTACAACGTGATGTTCTCCCAGCGCGGCGTGTACAACCTGTGCCACACCCTGCAGGACATGCGTGACTCCGAGCGCC GGGTCAGCGCCAACCGCCTGAACGGCGTGGATGGCGAACTGCTCAACACCGCCCAGGTCGCGGCCGAGATCCCGTACCTGGACTGCTCGAAGAACACCCG CTACCCGATCCTCGGTGCCACCGTGCAGCGCCGTGGCGGCGTGGCGCGTCACGACGCCGTGGCCTGGGGCTTCGCCCGTGCCGCCGACGCCCTGGGCGTG GACCTGATCCAGCAGACCGAAGTGATCGGCTTCCGCAAGGAAAACGGCGCGGTCATCGGTGTGGAAACCAACAAAGGCTTCATCGGCGCCAAGCGCGTCG GCGTGGTCACCGCCGGTAACTCCGGGCACATGGCCAAGCTGGCCGGCTTCCGCCTGCCGCTGGAATCGCACCCGCTGCAGGCGCTGGTATCCGAGCCGAT CAAGCCGATCATCGACAGCGTGATCATGTCCAACGCCGTGCACGGCTACATCAGCCAGTCCGACAAGGGCGACCTGGTGATCGGTGCCGGTATCGACGGC TGGGTCGGCTACGGCCAGCGCGGCTCTTACCCGGTGATCGAGCACACCCTGCAGGCCATCGTCGAGATGTTCCCCAACCTCTCGCGCGTGCGTATGAACC GCCAGTGGGGCGGCATCGTCGATACCTCGCCGGACGCTTGCCCGATCATCACCAAGACCCCGGTCAAGAACATGTTCTTCAACTGCGGTTGGGGTACTGG CGGCTTCAAGGCTACCCCAGGTTCGGGCAACGTCTTCGCCGCGAGCCTGGCCAAGGGCGAAATGCACCCACTGGCCGCGCCGTTCTCCATGGACCGTTTC TACAACGGCGCACTGATCGACGAACACGGCGCCGCCGCCGTCGCCCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGAGACACCGTCATGTTGCATATTTTCTGTCCCCACTGCGGCGAGCTGCGCTCCGAAGAAGAGTTCCACGCCTCTGGCCAGGCGCACATCGCCCGCCC GCTGGACCCTAACGCCTGCTCTGACGAGGAATGGGGTACCTACATGTTCTACCGTGACAACCCACGCGGTATTCACCACGAACTGTGGGACCACGTTGCC GGCTGCCGCCAGTATTTCAACGTCACTCGCGACACCGTGACCTACGAGATTCTGGAAACCTACAAGATTGGCGAGAAGCCGCAAGTGACCGCCAGCGGCA AGCAGAACAGCGCCGCGTCGACCGTCAAAGGCCAAGGGGAAAAAGTATGAGCCAGACCTATCGCCTCGCCAGCGGCGGCCGTATCGACCGCAGCAAGGTC CTGAACTTCACTTTCAACGGCAAGACCTACCAAGGTTATGCCGGTGACAGCCTGGCCGCCGCGTTGCTGGCCAACGGCGTCGACATCGTCGGCCGCAGCT
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| Amino Acid Sequence |
>sarcosine oxidase subunit beta
MQRYSGFGLFKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNVAVIEKGYLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLW EGLSQDLNYNVMFSQRGVYNLCHTLQDMRDSERRVSANRLNGVDGELLNTAQVAAEIPYLDCSKNTRYPILGATVQRRGGVARHDAVAWGFARAADALGV DLIQQTEVIGFRKENGAVIGVETNKGFIGAKRVGVVTAGNSGHMAKLAGFRLPLESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDG WVGYGQRGSYPVIEHTLQAIVEMFPNLSRVRMNRQWGGIVDTSPDACPIITKTPVKNMFFNCGWGTGGFKATPGSGNVFAASLAKGEMHPLAAPFSMDRF YNGALIDEHGAAAVAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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