Strain | Pseudomonas putida strain PA14H7 Circular_chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCTGGTACTTCCTGGTGCCCGACCTGCTGCCAGAGAACCTGCAGGAGTGGTACAAGCAAGATCTCAACCCGACCACCTCGGCGCTGATCAGCGTGATCG TCTGCCTGGGCCTGTTCACCGCGGCGCGGGTCTGCGAACAGGTGCGTACCGGTATCCAGGCACTGCCGCGCGGCCAGGAAGCCGCCGCCCGCGCCATGGG CTTCAGCCTGCCGCAGGTGTACTGGAACGTGCTGCTGCCGCAAGCCTACCGGATCATTATTCCGCCGCTTACTTCGGAATTCTTGAACGTATTCAAGAAC TCCTCGGTGGCCTCGCTGATCGGTCTGATGGAGTTGCTGGCGCAAACCAAACAGACCGCCGAGTTCTCGGCCAACCTGTTTGAAGCCTTCACCCTGGCAA CCCTGATCTACTTCACCCTGAACATGGGCCTGATGTTGCTGATGCGCCTGGTCGAGAAGAAAGTCGCCGTGCCCGGCCTGATCTCCGTGGGAGGTAAATA
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DNA Sequence for Gene |
>AW38_RS26400
ATGGACTTCAGTGGAATCATCCCTGCCCTGCCGGGCCTGTGGAATGGCATGGTCATGACCCTGCAGCTGATGGTCATGGGTGTTGTCGGCGGTATCGTGC TTGGCACCATCCTGGCGCTGATGCGCCTGTCGTCAAGCAAGCTGCTGGCGAATGTGGCCGGCGCCTACGTCAACTACTTCCGTTCCATCCCGCTGCTGCT GGTGATCACCTGGTTCTACCTGGCGGTGCCATTCGTGCTGCGCTGGATCACCGGCGAAGACACCCCGATCGGGGCGTTCACCTCCTGCGTCGTGGCGTTC ATGATGTTCGAGGCGGCGTATTTCTGTGAAATCGTCCGCGCCGGCGTGCAGTCGATCTCCAAGGGCCAGATGGGCGCCGCCCAGGCCCTGGGCATGACCT ACGGCCAGACCATGCGCCTGATCATCCTGCCCCAGGCCTTTCGCAAGATGACTCCGCTGCTGCTGCAGCAGAGCATCATCCTGTTCCAGGACACCTCGCT GGTCTACACCGTCGGCCTGGTCGACTTCCTCAACTCGGCACGGGCCAGTGGCGACATCATCGGGCGCTCCAACGAGTTCCTGGTATTTGCCGGCGCCGTG TACTTCGTCATCAGCTTCTCCGCTTCCTTCCTGGTCAAGCGTCTGCAGAAAAGGATAACCGTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCTCCATCAAGAACGTCAACAAGTGGTACGGGGACTTCCAGGTTCTGACCGACTGCAACACCGAGGTCAAGAAAGGCGAAGTGGTTGTCGTCTGCGGCCC GTCGGGCTCGGGCAAATCGACCCTGATCAAGTGCGTCAACGCTCTGGAACCCTTCCAGAAGGGTGACATCATCGTCGACGGCACCTCGATTGCCGACCCC AAGACCAACCTGCCCAAGCTGCGCTCGCGGGTCGGCATGGTGTTCCAGCACTTCGAACTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCC AGCGCAAGGTATTGGGCCGCAGCGAAGCCGAAGCGACCAAGAAGGGCCTGGCCCTGCTTGAGCGCGTCGGTCTCAGCGCCCACGCCAAGAAGCACCCGGG GCAACTGTCCGGTGGTCAGCAACAGCGTGTGGCGATTGCCCGCGCCCTGGCCATGGACCCGATCGTCATGCTGTTCGACGAACCGACCTCGGCACTGGAC
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Amino Acid Sequence |
>amino acid ABC transporter permease
MDFSGIIPALPGLWNGMVMTLQLMVMGVVGGIVLGTILALMRLSSSKLLANVAGAYVNYFRSIPLLLVITWFYLAVPFVLRWITGEDTPIGAFTSCVVAF MMFEAAYFCEIVRAGVQSISKGQMGAAQALGMTYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARASGDIIGRSNEFLVFAGAV YFVISFSASFLVKRLQKRITV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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