Pseudomonas putida PA14H7, AW38_RS26165
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain PA14H7 Circular_chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AACCGGTCACTGGCTGGCGTTCAGACTGGTTGCCGCCTGGTTTCGAGCTGATCACCAGTTCCGTGCGCAAGGATCCGCAGAGCAAGAACGCGGTCAGCAG CCTGATGTATGACGATGGCCTGGCGCGCTTTTCAGTGTTCGTCGAAGCCCTCGATAAAGGCACTGCCGCCGATATTCGCACGCAACTGGGCCCGACCGTC GCCGTCTCGCGGCGCCTGACCACGCCCCAGGGCGAAATGATGGTCACGGTGGTGGGCGAGATCCCCATCGGTACCGCCGAGCGTATCGCGCTGTCCATGC GCGCCCAGGATGCCCAGGCAAAAAAATGAGGCGCAAGCAATGAGGCTGACAGGTCGAGGATTGCTTGGCTGACATGATTGGCAAGCTTTGCAGTTTGCAA AATCTCCAGAATTTTTCTATAGGTCAGTCCTTTCGGGGTCTGGCCTTTCCTGCTTCTGCAGGTCCCTACTGCTAACCACGCTCGTTGTGACGGGAGCCGT
|
|
| DNA Sequence for Gene |
>AW38_RS26165
ATGTCAATACCACGCTTGAAAACCTACCTATCGATGGTCGCTGCCGTGTTCATGCTCGGTCAGGCGCTCACCGCCCAGGCCGAAGCCCTGCCGGACTTCA CCACCCTGGTCGAACAGGCTTCGCCTGCGGTGGTGAACATCAGTACCAAGCAGAAACTGCCGGACCGCAAGTACGCCGCAGGTCAAGTGCCTGACCTCGA AGGCTTGCCGCCGATGTTCCGCGAATTCTTCGAACGCAACATGCCGCAGACCCCGCGCTCGCCGCGCGGCGATCGCCAGCGTGAGGCGCAATCGTTGGGT TCGGGCTTCATCATCTCCAGCGACGGTTATGTGCTGACCAATAACCACGTGGTCGCCGATGCCGACGAGATCATCGTCCGCCTGTCGGACCGCAGCGAGT TGCAGGCCAAGCTGGTCGGCACCGACCCGCGCACCGACGTGGCCCTGCTCAAGGTCGAAGGCAAGGACCTGCCGACCGTCAAGCTGGGTGACTCCGAGAA GCTCAAGGTCGGTGAGTGGGTGCTGGCCATCGGTTCGCCGTTCGGTTTCGACCACTCGGTGACCAAAGGTATCGTCAGTGCCAAGGGCCGTACCCTGCCC AACGACACCTACGTGCCGTTCATCCAGACCGACGTTGCCATCAACCCGGGTAACTCCGGTGGCCCGCTGTTCAACATGAACGGCGAAGTGGTGGGTATCA ACTCGCAGATCTTCACCCGTTCCGGCGGCTTCATGGGCCTGTCGTTCGCCATCCCGATCGATGTGGCGCTGGATGTTTCCAACCAGCTGAAGAAAGACGG CAAGGTCAGCCGCGGCTGGTTGGGCGTGGTGATTCAGGAGGTCAACAAGGACCTGGCTGAATCCTTCGGCCTCGACAAGCCGGCCGGTGCCCTGGTCGCC CAGGTCCTGGAAGACGGCCCTGCTGCTAAAGGTGGCCTGCAGGTTGGTGATGTGATCCTGAGCATGAACGGTCAGCCGATCGTTATGTCCGCCGACCTGC CGCATCTGGTCGGTGGCCTCAAGGATGGCGCCAAGGCCAAGCTGGACATCATCCGCAACGGCAAGCGCCAGGCGCTGGACATCACCATCGGCGCACTGCC GGATGAAGATGCCGATATCACCACCAACCCCAATGGCGGCGTCGAGCGCAGCAGCAACCGCCTGGGCGTTTCGGTCTCCGACCTGACCGCCGAGCAGAAG AAAGCCCTTGAGCTCAAGGGCGGCGTGGTGATCAAGGAAGTCCAGGATGGTCCGGCGGCGCTGATCGGCCTGCGTCCGGGCGATGTCATCAGTCACCTGA ACAACCAGGCGATCCTCTCGGCCAAGCAGTTCACCGAAATCGCCAAGGAACTGCCGAAGAACCGTTCAGTGTCGATGCGTGTCCTGCGTCAGGGTCGCGC CAGCTTCATCACCTTCAAACTGGCTGAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCGGGTTGAGCAGAAAAGGGCAGCTTCGGCTGCCCTTTTTGCTGGGCGCTCACTCAGGTTTCCCAGGCCATGCAAACAAATCCCACAGCCCGGGTGCCC ACAGTTCACGTGACGCCAACGTCAAGCTTCAGGTACAATTCCCGGCTATTTTTCGGTGGGCGTCCGGCCCGCAGCCTTTTTGAGTGTTGACCCGTGAGTG ATTTGAGTCATATCCGCAATTTCTCCATCATCGCCCACATTGACCATGGCAAGTCGACCCTGGCCGACCGCTTCATTCAGATGTGCGGTGGCCTGACTGC GCGTGAAATGGAGGCCCAGGTACTCGATTCCATGGACCTGGAGCGTGAACGCGGTATCACCATCAAAGCCCACAGCGTCACCCTGCACTACAAGGCGCAG GACGGCAAAACCTACCAGCTGAACTTCATCGACACCCCCGGCCACGTTGACTTCACCTACGAAGTCAGCCGCTCGCTGGCAGCCTGTGAAGGTGCCTTGC
|
|
| Amino Acid Sequence |
>serine peptidase
MSIPRLKTYLSMVAAVFMLGQALTAQAEALPDFTTLVEQASPAVVNISTKQKLPDRKYAAGQVPDLEGLPPMFREFFERNMPQTPRSPRGDRQREAQSLG SGFIISSDGYVLTNNHVVADADEIIVRLSDRSELQAKLVGTDPRTDVALLKVEGKDLPTVKLGDSEKLKVGEWVLAIGSPFGFDHSVTKGIVSAKGRTLP NDTYVPFIQTDVAINPGNSGGPLFNMNGEVVGINSQIFTRSGGFMGLSFAIPIDVALDVSNQLKKDGKVSRGWLGVVIQEVNKDLAESFGLDKPAGALVA QVLEDGPAAKGGLQVGDVILSMNGQPIVMSADLPHLVGGLKDGAKAKLDIIRNGKRQALDITIGALPDEDADITTNPNGGVERSSNRLGVSVSDLTAEQK KALELKGGVVIKEVQDGPAALIGLRPGDVISHLNNQAILSAKQFTEIAKELPKNRSVSMRVLRQGRASFITFKLAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|