Pseudomonas putida PA14H7, AW38_RS23025

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046983 protein dimerization activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07730
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.20 PAS domain - - 318 439 2.7E-21
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 439 572 1.47E-17
CDD cd00130 PAS IPR000014 PAS domain 348 439 5.56155E-5
SMART SM00086 pac_2 IPR001610 PAC motif 533 574 20.0
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 708 797 4.1E-7
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 335 448 2.8E-13
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 706 798 1.6E-5
Gene3D G3DSA:3.30.450.20 PAS domain - - 452 571 5.5E-17
CDD cd01007 PBP2_BvgS_HisK_like - - 45 265 3.84805E-51
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 341 451 8.83E-22
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 48 268 4.2E-32
Gene3D G3DSA:3.40.190.10 - - - 132 227 1.0E-45
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 668 798 6.6E-30
CDD cd16917 HATPase_UhpB-NarQ-NarX-like - - 711 796 1.40855E-30
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 676 797 2.75E-19
Coils Coil Coil - - 574 601 -
Pfam PF08448 PAS fold IPR013656 PAS fold-4 336 444 8.9E-10
Gene3D G3DSA:3.40.190.10 - - - 37 264 1.0E-45
SMART SM00091 pas_2 IPR000014 PAS domain 329 395 0.087
Pfam PF07730 Histidine kinase IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain 602 668 7.9E-13
SMART SM00086 pac_2 IPR001610 PAC motif 402 442 0.23
Gene3D G3DSA:1.20.5.1930 - - - 572 661 2.0E-12
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 49 266 3.7E-22
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 480 581 1.4E-6
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 47 268 1.1E-17
SMART SM00091 pas_2 IPR000014 PAS domain 454 527 8.8
PANTHER PTHR24421 NITRATE/NITRITE SENSOR PROTEIN NARX-RELATED - - 284 798 2.4E-59
Pfam PF08447 PAS fold IPR013655 PAS fold-3 483 566 6.8E-11

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.