Pseudomonas putida PA14H7, AW38_RS21695
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain PA14H7 Circular_chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCTGGCGCGCGACGGCGAGCGCGATGCGGTATTCAATGTCTACGAAGCCTTGTTGGTGGCCCCAGCCACCCGTGAGGTAATCAAGATCAGCCTGGTGG ATAACCCGAAAATCCAGGCCCAGGGCTATATCCGTGAAGTCACCCCGACGGTCTCGGCGCAAAGCGGCACGGTGCAGGTCAAGGTGGCGTTGAATGAGGT GCCGGCCGGCATGGAACTGGGCTCGCCGGTCACCGCCACTGGCAATGTCCAGGGCAAGCCCAGCGTCGAGCTGCCCTGGTCGGCCCTGACCAAGGACCTG CATGACCCGGCGGTGTGGCTGGTGGGCGAGGACGACAAGGTGCGCCTGCAGAAGGTCAAGGTGATGCGCTACCTGACCGGCAAAGTGGTGGTGGGCGATG GTCTCAAAGGCGGTGAAACCGTCGTGGTAACGGGCGGGCAACTGCTCAATCCGGGCATGCAGGTGGAAATCGCGCCGCTCAAGGACAGTGGGGTGGCGCA
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| DNA Sequence for Gene |
>AW38_RS21695
ATGAAAGCAACCACGCTTGTCTTGGGCGGTGCGCTGCTGCTCGTGGGTTGCGGCAAACAAGCCAGTACGCCTGAGCCTGTACGGCCGGTGCTGTCGATCA TTGCCCAGCCGCAGGTGCAGGCCAATCTCGGACGATTCGCCGGCAGCATCCAGGCCCGTTACGAAAGCACCTTGGGTTTTCGTGTGGGCGGCCGGATTGC CCGACGCTGGGTCGATGTCGGCAGTCAGGTGAAACCAGGCGATGTGCTAGCCAGCCTTGACCCCACCGACCAGCGCAACCAGTTGCGCGCCGCCGAGGGC GATCTGGCGAAGATCCAGGCGCAGTGGATCAACGCCCAGGCCAACGCCCGGCGTCAGCAGCAGTTGTTCGATCGCGGCGTGGGCGCGCAGGCTCAACTGG ACATCGCCCAAACCGACCTTAAGACCACCGGAGCGTCCCTGGAGCAGGCCCGGGCGGCGGTTGACCAGGCCCGTGATCAACTGGGTTACAGCGAACTGAA GACCGATCATGGCGCCGTGGTCACCAACTGGCAGGCCGAGGCCGGGCAAACGGTGAGTGCCGGCCAGGCCGTGGTTACCCTGGCGCGGCCGGATATCAAG GAAGCGGTGATCGACCTGCCGACCAACCTGGCCGAGCAATTGAGCACGGAGCTCAAGTTTCTGGTGGCCTCGCAACTGGACCCGGACATCAATACCACGG CGACCTTGCGTGAGCTGGAGCCCCAGGCCGACGCCACCACGCGCACCCGTCGCGCTCGCCTGACCCTGGTCGATACACCGAATGCGTTCCGCCTGGGCAC GGCAATCAGCGTCACCCTGACCTCGGCGGTTTCGCCACGCACCGAACTGCCGGCGTCGGCCTTATTGGAAAGCGACGGCAAGACCCGGGTATGGGTGGTC GATCCGCAGCAAAACACCGTTGCCACACGTGATGTGAAGCTGCTTGAACGTACCCCCGGCAGTGTGGTGCTGGCCTCGGGCGTGCAGCCTGGCGAGCGAG TGGTAACCGCCGGTGTGAACAGTCTCAAACCGGGCCAGAAGGTCATCGTCGACGAGGAAGACCCGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAGGAAGCTTCAACCTGTCGGAGTGGGCGCTGAAGCACCAATCCTTTGTCTGGTACCTGATGTTCGTCGGCTTGCTGATGGGCGTGTTTTCCTACATGAA CCTGGGGCGTGAGGAAGACCCTTCGTTCACCATCAAGACCATGGTCATTCAGACCCGCTGGCCGGGTGCGACCCAGGATGAAACCCTGTACCAGGTCACC GACCGCATCGAGAAGAAGCTCGAGGAGCTGGACTCGCTCGACTATGTAAAAAGCTACACCCGTCCGGGTGAGTCGACGGTCTACGTCAACCTGCGCGACA CCACCAAAGCCGAGGATATTCCGCAGATCTGGTATCAGGTGCGCAAGAAGATCCAGGACATCCGCGGCCAGTTTCCCCAGGGCATTCAGGGCCCGGCCTT CAACGATGAGTTCGGTGACGTGTTCGGCTCGATCTACGCGTTTACCGCCGATGGCCTGAGCATGCGCCAGCTGCGCGACTACGTCGAACAGGTGCGCGCC
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| Amino Acid Sequence |
>RND transporter
MKATTLVLGGALLLVGCGKQASTPEPVRPVLSIIAQPQVQANLGRFAGSIQARYESTLGFRVGGRIARRWVDVGSQVKPGDVLASLDPTDQRNQLRAAEG DLAKIQAQWINAQANARRQQQLFDRGVGAQAQLDIAQTDLKTTGASLEQARAAVDQARDQLGYSELKTDHGAVVTNWQAEAGQTVSAGQAVVTLARPDIK EAVIDLPTNLAEQLSTELKFLVASQLDPDINTTATLRELEPQADATTRTRRARLTLVDTPNAFRLGTAISVTLTSAVSPRTELPASALLESDGKTRVWVV DPQQNTVATRDVKLLERTPGSVVLASGVQPGERVVTAGVNSLKPGQKVIVDEEDPQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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