Strain | Pseudomonas putida strain PA14H7 Circular_chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCGCCCTCGACCCGCAGACCACCGCCTCGGTGTTGCAGTTGCTGGCCGAGATCAACCGCGAACTGAAGCTGACCATCGTGCTGATCACCCATGAAATGG ACGTGATCCGCCGGGTCTGTGACCGTGTGGCAGTCATGGATGCCGGGCAGATCGTCGAGCAAGGCCCGGTGGCCGATGTGTTCCTGCACCCGCAGCACCC GACCACCAAGCGCTTCGTCCAGGAAGACGAGCAGGTCGACGAAAACGAACAGCGCGACGACTTCGCCCACGTGCCAGGGCGCATCGTGCGCCTGACCTTC CAGGGCGACTCGACCTACGCGCCGCTGCTGGGCACCGTCGCCCGGGAAACCGGTGTGGATTACAGCATCCTGGCTGGGCGCATTGATCGCATCAAGGACA CCCCGTATGGGCAGCTGACCCTGGCCGTCACAGGCGGCGACATGGAAGCGGCGTTTGCCCGCTTCACTGCAGCTGATGTTCATATGGAGGTACTGCGTTG
|
|
DNA Sequence for Gene |
>AW38_RS20095
ATGGACGCCTTGAGTTTCTTTGCCAATGTCGACTGGGCCGAAATCTGGCTGGCCACCATCGACACCATGATCATGCTGTTCGGGTCGCTGTTCTTCACCG TGCTGCTCGGCCTGCCGCTGGGCGTACTGCTGTTTCTCTGCGGCCCGCGCCAGCTGTTCGAACAGAAGGGCGTATACGCGCTGCTGTCGCTGGTGGTGAA CATCCTGCGCTCGCTGCCGTTCATCATCCTGCTGATCGTGATGATTCCGTTCACCGTGCTGATCACCGGCACCTCGCTGGGTGTCGCCGGCGCCATTCCA CCGTTGGTGGTGGGGGCTACGCCATTCTTCGCACGCCTGGTGGAAACCGCGCTGCGTGAAGTCGACCGCGGCATCATCGAAGCCACCCAGTCGATGGGCG CCACCACCCGCCAGATCATCATCAACGCCTTGCTGCCCGAGGCCCGTCCGGGCATCTTCGCGGCCATCACCGTGACCGCCATTACCCTGGTGTCGTACAC CGCGATGGCCGGTGTGGTGGGCGCTGGCGGCCTGGGTGACCTGGCGATCCGCTTCGGTTACCAACGTTTCCAGACCGATGTGATGGTAGTCACCGTGGTC CTGCTGCTGGTACTGGTTCAAGTCCTGCAGAGCGTGGGCGACAAACTGGTTGTGCATTTTTCCCGTAAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CCCCATGGGTCGGCACTGCCGACGCACCGGGGGCCGGATCGGCCCTCACAAGGAGTGATTTGATGAAAAAGCTGCTTGCTGTTGTCGCCGCTGTCGCGGC CTTCTCGGCCCAGGCCGAGACCCTGACTGTTGCCGCCACCCCGGTGCCGCACGCCGAGATCCTCGAGTTCGTCAAACCGGCCCTGGCCAAAGAAGGCGTG GACCTGAAGGTGAAGGTGTTCACCGACTACATCCAGCCGAACGTACAGGTGGCCGAGAAGCGCCTGGACGCCAACTTCTTCCAGCACCAGCCGTACCTGG ATGAGTTCAACAAGGCCAAGGGCACCCAGCTGGTGAGCGTTGCCGGTGTGCACCTGGAGCCGCTGGGCGCCTACTCGAGCAAGTACAAGAAACTCGACGA GCTGCCGTCGACTGCCACCGTGGTCATCCCCAACGACGCCACCAACGGCGGTCGTGCCTTGCTGCTGCTGGACAAGGCCGGTGTGATCAAGCTCAAGGAC
|
|
Amino Acid Sequence |
>metal ABC transporter permease
MDALSFFANVDWAEIWLATIDTMIMLFGSLFFTVLLGLPLGVLLFLCGPRQLFEQKGVYALLSLVVNILRSLPFIILLIVMIPFTVLITGTSLGVAGAIP PLVVGATPFFARLVETALREVDRGIIEATQSMGATTRQIIINALLPEARPGIFAAITVTAITLVSYTAMAGVVGAGGLGDLAIRFGYQRFQTDVMVVTVV LLLVLVQVLQSVGDKLVVHFSRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|