Strain | Pseudomonas putida strain PA14H7 Circular_chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GATGCCACCTGCGCCGGTGCCCAGGCCCGGGACATCGCCCTTTGGCCTTCGCCGCTGGAGCCCTGGCTGCCCCGGGTGGAACGCCGCGAGGCGCGCTTGC CCAAGATCGATCCGCAGTGCCCGCCGCAGGTGCCGCCCAGTGCACCGCCGTTGTCGATCGTCGGTGTGCGCCAGGGGGATCAGTTGCGCCGCCCGGCCAC CAGCAGCGAGCCATTGCGCTTCAAGGTCTCGGCCCTTGGCGGTAACGGTCGCCACTGGTGGTTCCTCAACGGTGCGCCACTGGGCGAAACCAGCGGCCAG GAAAACCTCACGGCGAGCTTCGAACAGGCCGGGCGTTTCGAGTTGAGCGCCCTGGATGAAAGCGGCGAAACCGCCCGGGTGGAGTTCCAGGTCAATGACT GACGCCGCCGATTAGACGATGCCGGAGCCAGCACCTACGCTTGAATTGACGAGGCCGCCGTTCTGGCGGCTTCGTACTGTTCGGGATCATGGAGTGTCCG
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DNA Sequence for Gene |
>AW38_RS17505
ATGCGTGCGTTGGCTGTCGCGATTGTTGGGTTGTCCTGGGCGAGCGTTGCCAATAGCGAACCCCTGCCGCGCTTTCTCGACAGCCACGAAATCGAGCGAA ACCTGCCGGCCCCCAACTTGCCGGCCGATGCCTATAGGCCGAGCAATCCGGGGGTGCAGGTGCCGATTCCGGTGACCCAGGCCCAGCCGTTGTTGCGCGG CACGCGGATCTTCCTGCGCAAGGTGCGCTTCGAAGGCGGCAGCATCTATCCGTTGAGTGACCTGCGCGACAACTATCAGAGCCTGGTCAACCGCGAAGTC AGCCTGGGCGAGCTGATGGATGCCACCCAGCGCCTGACCCAGCGCTACCAGCAGGACGGCTACCTGCTGTCCCATGCCTATCTGCCTGAGCAGGATTTCG CCGATGGCCGGGTGCGGGTGGTGCTGGTCGAGGGCTACATCGACGATCTGCAATTGCACGGTGAAGTTGGCCCGGCGGCGGCCTATGTGGAAAAGCTGGT GGGCAGGCTCAAGGCCGAGCGGCCACTGACTCGCGCCACCTTCGAGCGTTATGTCGCGCTGATGAGCCGTCTGCCGGGTTTCAGCGTGCAGGCGCGCTTG TCGCCGGCGAACGCCGCCAATGGCGCCAGCCGGCTGATCGTCGAGGCCACGCGTCGGCCTTTCAACGCCACAATGACTGCCACCGACGGCACCCGCGATG ACCCCCAGGCATTGCTCACGGTGAACAGCAATGCGCAGACGGCGCTCGCTGAACAGTTCAGTGTCACCGCTTTAGCGCCGCGCGGGGAAGATCACGAAAG CTACTTTCGCCTGGACTACTCCCAGTACCTGGACGATCAGGGCAGCCAGCTGCACCTGTCGGCGTCGCGTTACGAAAGCGACCCCAGTGCCCAGGTGCTG CTCGGCGATGGCACCCAGCTCAAGGCCCATCGCGAGAATGACCGTTTCTCGGCCGGCCTCAGTCAGGTGCTGCTGGCCGCGCCCGGCGAGTCGCTCAACG TTGCCGCGCGCTTCTACATGGTCAATGACGATGTCGTGTATCGCGCGGTCGGTGCACCCCTGCGCCTGAGCAACCGCACTGACGTGCGCGCGTTGGGCTT TGAAGGTGAGTGGCGCAAGGCCGATGCCGAGCAACTGCGGATTGTCAGTGGTGGGGCCTACCAGGGCCTGGATTACCTGGGGGCGAAAACCAACAGCGAC TTCGACCTGGATTTTCTGCGCTTGCGCCTGTCCGGGTTGCAGAGCGACCGCCTGTTTGGCAACTGGCAGGGCGTGGCGTCGGCGGCTTTGTACTGGAGTG GCGACAGCCTGCCCGACAGCGAGCGGGTGGTGTTTGGCGGGCAGAGCTTTGCCCGCGGCTATCCCGCCGACCAGGCCCTGGGTGACAAGGGCTGGGGTCT GGCATATGAGGTGAATTACAGTTTCAACGGCGATGGCCGCTGGGTGAAGCTGCTGCAACCCTATGCCGTGCTGGATACTGCGCGCACCTGGTTCAATGAA GTGGACCTGCGCGATGCACACTTGAGTTCAGTGGCGTTGGGGCTGCGTATTGGTGATGGGCGTTTCTATAACCTGGCGCTGGAGCTGGCCAAGCCACTGT CGGATGTCGCCCTCGACAGCTTTGACCGGGAACCGCGGGTGAGTTTGAGTTTCAGTTTGCAGCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACTTGCGTCGCCTGGATTACGACCCTTTCGGGCTCGATCGCCGGCAACGCCGGCGCCCCACAGGGGCAGCAGCCCCTGCAGGTTCATTGCACCAACTGCA TCCGCGGTTTGGGGAACAGGTTGTCCAGGGTTTCCAGCAGGCGAGTGTGGTAGATCGGCTTGCGGAACAGGTCCAGCACCTGCAGGCGCAGCAGGTCGCT GATGTCGTCCATGTCGGCATGCCCGGAGGTGACAATCACCGGCAGGTGCTGGCGTGAGGTGTGCTCGCGCAGGCGCTTGATCAGTGATATGCCGCTTTCC TCCGGCATCCGCAGGTCAGTGATGACCAGGGCCACGTCCGGGTGGCGGGTGAGCTGTTGCAGGGCGAGTTTGACCGAGGTAGCCGTGTGACAGCAAAACC CCTCACCCTCCAGCAATTCGGCAAGTTCCAGCAAGGCGTCCTCTTCGTCATCCACCAGGAGCAACTGTTGACGGGGGGAAGAGGTCGGCATAGGGCAGTC
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Amino Acid Sequence |
>potassium ABC transporter ATPase
MRALAVAIVGLSWASVANSEPLPRFLDSHEIERNLPAPNLPADAYRPSNPGVQVPIPVTQAQPLLRGTRIFLRKVRFEGGSIYPLSDLRDNYQSLVNREV SLGELMDATQRLTQRYQQDGYLLSHAYLPEQDFADGRVRVVLVEGYIDDLQLHGEVGPAAAYVEKLVGRLKAERPLTRATFERYVALMSRLPGFSVQARL SPANAANGASRLIVEATRRPFNATMTATDGTRDDPQALLTVNSNAQTALAEQFSVTALAPRGEDHESYFRLDYSQYLDDQGSQLHLSASRYESDPSAQVL LGDGTQLKAHRENDRFSAGLSQVLLAAPGESLNVAARFYMVNDDVVYRAVGAPLRLSNRTDVRALGFEGEWRKADAEQLRIVSGGAYQGLDYLGAKTNSD FDLDFLRLRLSGLQSDRLFGNWQGVASAALYWSGDSLPDSERVVFGGQSFARGYPADQALGDKGWGLAYEVNYSFNGDGRWVKLLQPYAVLDTARTWFNE VDLRDAHLSSVALGLRIGDGRFYNLALELAKPLSDVALDSFDREPRVSLSFSLQL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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