Pseudomonas putida PA14H7, AW38_RS16985
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0015562 | efflux transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Cellular Component | GO:0019867 | outer membrane |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF02321 | Outer membrane efflux protein | IPR003423 | Outer membrane efflux protein | 239 | 424 | 2.3E-31 |
| NCBIfam | TIGR01844 | JCVI: TolC family outer membrane protein | IPR010130 | Type I secretion outer membrane protein, TolC | 18 | 439 | 6.3E-125 |
| Pfam | PF02321 | Outer membrane efflux protein | IPR003423 | Outer membrane efflux protein | 23 | 213 | 1.2E-19 |
| PANTHER | PTHR30026 | OUTER MEMBRANE PROTEIN TOLC | - | - | 4 | 435 | 5.8E-87 |
| SUPERFAMILY | SSF56954 | Outer membrane efflux proteins (OEP) | - | - | 20 | 438 | 8.5E-85 |
| Gene3D | G3DSA:1.20.1600.10 | Outer membrane efflux proteins (OEP) | - | - | 20 | 440 | 3.4E-81 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.