Pseudomonas putida PA14H7, AW38_RS12660

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain PA14H7 Circular_chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACCGCGTTCCAGATCGGTTTCATGATCTTCATTCCGTTCCTGATCATCGACCTGGTGGTGGCCAGTGTGCTGATGGCCATGGGTATGATGATGTTGTCG CCGCTGATCATCTCGTTGCCGTTCAAGATCATGCTGTTCGTCCTGGTCGATGGCTGGGCGCTGATCATGGGTACCTTGGCCGGCAGTTTCGGCGGCGTCT GACGCCGCGAGGAGAAGTAGTCCATGACCCCTGAAGTGGCTGTCGACCTGTTTCGCGATGCGCTGTGGCTGACCACCCTGATGGTCGCCATCCTGGTGGT GCCGAGCCTGTTGGTGGGCCTGATCGTTGCGATGTTCCAGGCCGCCACGCAGATCAACGAACAGACCCTGAGCTTCCTGCCGCGCCTTTTGGTGATGCTG GTGACGCTGATCGTGGTCGGCCCGTGGCTGGTGCAGAAATTCATGGAATACATCCTGTCGTTGTACGGCAGCATTCCGCAACTGATCGGCTGACCCGGCG
DNA Sequence for Gene
>AW38_RS12660
ATGCTCGAGCTTACCGATGCGCAGATCGGCGCCTGGGTGGCCAGTTTCATCCTGCCGCTGATTCGCGTCACGGCGGTGCTGATGACTATGCCGATTTTCG GTACGACCCTGGTGCCGACGCGTATTCGTCTGTATTTCGCCCTGGCGATTACCGTGGTGATCGTCCCTGGCTTGCCGCCAATGCCGGTGGTCGAGTCGCT GGATCTCAAGACGATGTTGCTGGTGGCCGAGCAGATCATCATTGGCGCTGTGTTCGGCATGGCGCTGCAGCTGTTCTTCCAGATATTCGTCATCGCCGGG CAGATCGTCGCGATCCAGATGGGCATGGCCTTTGCCTCCATGGTCGACCCGGCCAACGGCGTCAACGTCGCGGTGGTCAGCCAGTTCCTGACCATGCTGG TGACCTTGCTGTTCCTTGCCATCAACGGCCACCTGGTGGTCTTCGAGGTGCTGACCGAGAGCTTTACCACCTTGCCGGTGGGCGGCGGCTTGCTGGTCAA TCATTTCTGGGACCTGGCCGGGCGCCTGGGCTGGGTGCTGGGTGCGGCGCTACTGTTGGTGTTGCCGGCGATTACCGCGCTGCTGGTGGTCAACATTGCT TTTGGCGTGATGACCCGGGCGGCGCCGCAGTTGAACATCTTTTCCATCGGCTTTCCGCTGACCCTGGTGCTGGGGTTGGTGATCTTCTGGATCACTCTGG CCGATATTCTTCCTCACTATCAGTCGCTGGCCTCCGAGGCTTTGCAATGGCTGCGTGAACTGGCACGGGCGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATGGCAGAGAGCGAAAGCGGTCAGGACAAAACAGAAGACCCCACGGAGAAGCGCAAGAAGGACGCGCGCGAGAAGGGTGAGATTGCCCGCTCCAAAGA ACTCAACACGGTGGCGGTGACCCTGGCGGGTGCGGGGGCGCTGCTGGCGTTTGGCGGTGGCCTGGCGCAAACCCTGATGGAGCTGATGCGCAGCAACTTC ACCTTGTCGCGCGAGGTGCTCATCGATGAGCGCTCGATGGGTATTTTCCTCATGGCCTCGGGCAAGATGGCCTTGTTGGCCACTCAGCCGGTGTTGCTGG TGCTGTTGATCGCGGCAATTATCGGCCCGGTGTCGCTGGGTGGTTTCCTGTTTTCCAGTAGCTCGCTGGCGCCGAAGTTCAGTCGCATGAACCCGCTGTC GGGGATCAAGCGGATGTTTTCGGTCAATGCCTTGTCCGAGCTGCTCAAGGCACTGGCCAAGTTCTTCATGATTCTCATCGTCGCCCTGACGGTGCTGTCG
Amino Acid Sequence
>flagellar biosynthesis protein FliR
MLELTDAQIGAWVASFILPLIRVTAVLMTMPIFGTTLVPTRIRLYFALAITVVIVPGLPPMPVVESLDLKTMLLVAEQIIIGAVFGMALQLFFQIFVIAG QIVAIQMGMAFASMVDPANGVNVAVVSQFLTMLVTLLFLAINGHLVVFEVLTESFTTLPVGGGLLVNHFWDLAGRLGWVLGAALLLVLPAITALLVVNIA FGVMTRAAPQLNIFSIGFPLTLVLGLVIFWITLADILPHYQSLASEALQWLRELARAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site