Strain | Pseudomonas putida strain PA14H7 Circular_chromosome, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGCCGATGCCATCCTGTTGCTGCAGTGGACAGCGCGCCATCTGCCCGACCATTACCCGCAGCTGGAACAGATGCTGCGCGCCTGGGGCGGCAATGCGTC GGGCTGCGCCATCGCCAATATCGACAACACGGGCGAAGTGCACCCCGACACCTACTGGTGGCAACACTCGGTGGGCAACGTGCGGCGCACGCCGTTCCGC ACCCTGTGGCTGGAGCAGCCCGACCCGCTGCTGTTGCGCCTGCGCGAGCATCCCCGGGCCGTCACCGGGCGCTGCGCCGCCTGCCGCTGGCTGAGTATCT GCAACGGCAACACCCGCACCCGCGCCTGGGCCGCCGGTGACCTCTGGGGCCAGGACCCGGGCTGCCACCTGAGCGATGAAGAAATCGGCCTGCCGCCAAC CGCCTGCATTCCTTGCGTCACGCATTGACAACCTGACCGGACAAGCCGCCGACACAGGCGGCCATCCGGCGCCCCTGATGATGGAACAAGGAACGCCCTC
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DNA Sequence for Gene |
>AW38_RS08455
ATGCATTGTGCCTCCGTTCTACCCGCCGCCCTGCACTCGCCCTTCAACCCCGGTGAAGTCGCCCTGGTCGGCGCCGGGCCCGGCGATCCGCGCCTGCTTA CCCTGCGCGCCTGGAGCCTGCTGATGCAGACCGATGCCGTGGTTTATGACCGCTTGATCAGCAGCGAACTGCTGGCACTGATTCCGCCTGGCTGCAGCCG CCATTACGTGGGCAAGATCAGCGGCTACCACAGCCTGCCCCAGGCGCAGATCAATCAGCTGCTGGTCGACCTCGCGGCGCGCGGCCAGCGGGTGGTGCGG CTCAAAGGCGGCGACCCGTTCATCTTCGGTCGGGGCGCCGAAGAGCTCGACTTTCTCCTGCAGCACGGCATCGATTGCCAGGTGGTGCCGGGCATCACCG CCGCCGCCGGCTGCAGCGCCTATGCCGGGATCCCCCTGACCCACCGCGACCTGGTCAACTCCTGCCGCTTCATCACCGGCCACCTGCAACAAGACGGCGC ACTCAACCTGCCCTGGCAGAGCCTGGCCGACAGCAGCCAGACCCTGGTGTTCTACATGGGCCTGTCCAATCTGCGGCTGATCACTGAGCAGTTGATAGCC GCCGGGCTCGCCGCCGATACGCCGGCAGCCCTGATCAGCCACGGCACCTGCGCCGACCAGCAGGTGCTGCGCGGTACGCTCGCGATGTTGCCACGCCTGG CCCGGCAATGCCCCGGCGCCACGCCAACGCTGACGGTGATCGGCAAGGTGGTCGGGTTGTTCGCCGACCAGGCACTGCGCTACCCGGCGCACTTTGCCGC TGCCGCGCTGGCCGCCGAGGTCGCGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAGCCCTGGCCCTTGTCCCGCTGTTGTGGATGGCTTCGGCCCAGGGCAGCGCCGTTGTCGACCAGGCCGCCCAGGACTATCAGCAACATTGCCAGCAATG CCATGGCGCCACGCGTTTCGGCGCCAGCGGCCCAGCCCTGCTGCCGGAAAGCCTGAGCCGGATCAAGCCGGCCGAGATCCGCCAGGTGATCAGCGCGGGC CGCCCGGCCAGCCAGATGAGCGGCTTTGCCAAGGTGCTGAGCCCAACCCGGATCGACGGCCTGGTGACCTACCTGCAACAGCCGCCGGCCACACCACCGA CCTGGAGCGATACCCAGATCCGCGCCAGCCACCAGCTACTGAACGCCGTCGATAGCTTGCCAGGCACGCCCCAGCACGGTGCCGACCCGCTGAACCTGTT CGTGGTGGTCGAAGCCGGCGACCACCACATCAACATCCTCGACGGCGACCGTTTCACCGTGCTGGCGCGCTTTGCTTCGCATTTTGCCGTGCACGGCGGG
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Amino Acid Sequence |
>uroporphyrin-III methyltransferase
MHCASVLPAALHSPFNPGEVALVGAGPGDPRLLTLRAWSLLMQTDAVVYDRLISSELLALIPPGCSRHYVGKISGYHSLPQAQINQLLVDLAARGQRVVR LKGGDPFIFGRGAEELDFLLQHGIDCQVVPGITAAAGCSAYAGIPLTHRDLVNSCRFITGHLQQDGALNLPWQSLADSSQTLVFYMGLSNLRLITEQLIA AGLAADTPAALISHGTCADQQVLRGTLAMLPRLARQCPGATPTLTVIGKVVGLFADQALRYPAHFAAAALAAEVAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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