Pseudomonas putida PA14H7, AW38_RS05440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain PA14H7 Circular_chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTCAATCAGGTCGGCCGTTGGCTGAGCTGCGCGTGACGCGGCCTGGGCGGCATCGACCCGGGTTTGCTGGTCGGGGTTGAGCATCTCCATCAGCAGGCT GCCTTGCGTGCGCCGGGCTGCCAGTTCGCGCAGCAGCCACAGTTGCAGGACATGATGGTCAGGGTTGTCGTGTTGCTCGCCCACCAGTACCCGTGGTGCA GTTGCCAGCCGCTCGAGCAGTTGCTGCGGGGAAAGGGTGCGGCCGCTGGCCAGTTCGCGGATCACGCCAAGGTCGGCGTGGTCGCGCCCCAGGGGAGCTA TCGGGGCCGGTGGTGGCAGCACCTGATGGGATTGGCAGGCCGTCAGCAGGCCGATCATGCACAGCAGCAGTACGCGCATCGGATTTCCTTGTCGTCACGG AGTAGTCGCTTGCAAGAGCCTACGTTGGTCGCGTGCAGGTTGCCAGACAGAGGGGTCTGTATGTATAACCAGTGCTCCAGCCGCCAGCCTGTATTGTCCC
DNA Sequence for Gene
>AW38_RS05440
GTGATCGCCCATTCCGTCGACGACCCGTTCTATTACCTGCACAACTTCCAGCAAGTGCTCGACTGGATCGAGCTGCGTTATGCCGACCTGCTCGACGCCC AGGAGCAGGCCTTCATCGGCCAGTTCCGGCAGCAGCCCCAAGCCACTCGGGCCTTGCTGGTGCGCATGGTGATGCGCAAGGGCCTGCTGTTTCGCCCGAG CAAGCTCGAGTACGCCGAAATCGGCTCGACCCAGGCGGCCTTGGCGCCACTGCTGGCACTGGGCTGGGTAGTCGATGACAGCCCGTTGAGCCTTGAGCAG CTGTTTCACCTGTTGCGCAAGGACGAACTGGCCAAGGGCTTTGCCGACCGGCTCGAGCGGCCGCGGGCGGCCAAGGGTGAACTACTGGCCCAGTTGCAGG CGCTTGAGCTGCAACCGCGGCCGTTGCAGCAATGGTTGCCGGGCTTCGGCGAGCCGATCATCGAATTGCGCCTGCAGGCCTTGTGTGACCGCCTGCGCCT GCTGTTTTTCGGCAACCTGTACCAGGACTGGTCGGAGTTCGTGCTGGCCGACCTTGGCCTGCTGCGCTACGAGCAAGTAGCCTTCAGTGACGATTCGCGG GCCTTGCGCAAGCGTAGCGATATCGAGGTGGCGCTGGCCTTGCACCAGTGCGCCGAGCTGCTGGAGCAGGGCGTGGCGCTGGAACAGGTGGTCGAGCACA TTGAGTGTCTGGACAGCGACAACCCCTGGCTGCTGCGTCGGCGTTCAAGGCTGCTGTATCAGCTCGGCCAGCACAGTGAGCGTCTTGGCGACTGGCCGCT GGCTTTGCGCATCTACCCGCGTAGCCAGCATCCGCAGGCGCGCATCCGTCATGTGCGGGTGCTGGAGCGTAGCGAACAGTGGTCGGCGGCGCTCGAGCTG GCTTCACACATTGCTCGGCAACCGGCCAATGGCCTTGAAGTCCAGGCCTTGGCGCGGATGTTGCCGCGCTTGCAGCGCAAACTGGGCGGGCCGCCGCAGC CTCGCCGGGCCAAGCCGCAGGTGAGCCTGGTCGAGTTGCAGTTGCCGGCCGAGCTGGCGGCCCTGGGGGTGGAGCAGGCCGTGCAACTGCACCTGGGGCA GGGTGGCGGGCAGGTGCATTATGTCGAGAACACCCTGTTCAACAGCCTGTTCGGCCTGCTGTGCTGGGAGGCGATATTCGCGCCGTTGCCGGGGGCGTTC TTCCACCCATTCCAGAGTGCGCCGCTGGATCTGCATGACGCCGAGTTTCATGGCCGGCGCAGCGAGCTGTTCGCGCGCTGCCTGGGGCAACTGGACGACG GCAGCTACCGGCAGACCATCCGCCGCCATTTCAGCAGCAGGCAGGGGCTGCAATCGCCTTTCGTCTACTGGCAGGTGCTCAGCGAAGAGTTGCTTGAACA AGCCCTGGCGTGCCTGCCCGCCGCGCACCTGAAAAGCTGCTTCGAGCGCCTGCTCGAAGATATCCAGGGTAATCGTTCGGGCATGCCCGACCTGATCCAG TTCTGGCCCGAACAACAGCGCTACCGCATGATCGAGGTCAAGGGCCCGGGCGATCGCCTGCAGGACAGCCAGTTGCGCTGGATCGAGTTCTGCGCCGGGC ACGGCCTGCCGGTAGAAGTCTGCCACGTGCAATGGGCGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTACCGCGTGGCAGTGCGGGCGTTGTGTGAGTTCAGTGCCAAGGTTGGCGACCTCGACCTGCGTTTCACCCCGTCGCCCACTGCCGAAGAGGGCATCAG CGGTCACCGGCGGGTAGTGGCCGGGCGGGGCGAGGGCTACGAGGCCGAAGTCAGCCTCGAAGGCCAGTACGCCACCTTGCAGGTGCGCGGCCGCGCCGAC GGCTACGACTCGCGGCTCAATCGCCTCGAAGAAATCAAGACCTACCGTGGCGACCTGGCGCGCCAGCCCGACAACCACCGCCAACTGCACTGGGCCCAGG CCCGGGTCTACGGTTGGTTGCTGTGCCAGCAGCGCCAGTTGCCAGGGCTGTGCCTGGCGCTGGTGTACCTGAATGTCGACAGCGATGAACAGACGCTGAT CGAAGAACAGCACAGTGCCCAGGCGCTTGAGCAGTTTTTCAATGCCCAGTGCGCGATCTTCCTGCACTGGGCCGAGCAGCAGATGCAGCGCCAGGCTTTG
Amino Acid Sequence
>nuclease
MIAHSVDDPFYYLHNFQQVLDWIELRYADLLDAQEQAFIGQFRQQPQATRALLVRMVMRKGLLFRPSKLEYAEIGSTQAALAPLLALGWVVDDSPLSLEQ LFHLLRKDELAKGFADRLERPRAAKGELLAQLQALELQPRPLQQWLPGFGEPIIELRLQALCDRLRLLFFGNLYQDWSEFVLADLGLLRYEQVAFSDDSR ALRKRSDIEVALALHQCAELLEQGVALEQVVEHIECLDSDNPWLLRRRSRLLYQLGQHSERLGDWPLALRIYPRSQHPQARIRHVRVLERSEQWSAALEL ASHIARQPANGLEVQALARMLPRLQRKLGGPPQPRRAKPQVSLVELQLPAELAALGVEQAVQLHLGQGGGQVHYVENTLFNSLFGLLCWEAIFAPLPGAF FHPFQSAPLDLHDAEFHGRRSELFARCLGQLDDGSYRQTIRRHFSSRQGLQSPFVYWQVLSEELLEQALACLPAAHLKSCFERLLEDIQGNRSGMPDLIQ FWPEQQRYRMIEVKGPGDRLQDSQLRWIEFCAGHGLPVEVCHVQWAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site