Pseudomonas putida PD1, EX27_RS25545

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain PD1 EX27DRAFT_scaffold00015.15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TACGGCCCTTACCACTTCCCGGAAAAGCTCATCCCGCTGATGATCGTCAACGCTCTGGCCGGCAAGCCGCTGCCGGTGTACGGCGATGGCCAGCAGATCC GCGACTGGCTGTATGTGAAAGATCACTGCAGCGCCATCCGGCGGGTGCTGGAAGCCGGCAAAACCGGTGAGGTTTACAACGTGGGCGGCTGGAACGAGAA GCCCAACCTGGAAATCGTCAACCGCGTGTGCGCGTTGCTGGACGAATTGCGTCCGCGTGACGATGGCAAACCCTACGCCGAGCAGATCACCTACGTCACT GACCGCCCCGGCCACGATCGCCGCTACGCGATTGACGCGCGTAAACTGGAGCGCGAGTTGGGCTGGAAGCCAGCCGAAACCTTTGAAACCGGCATTCGCA AGACCGTGGCCTGGTATCTCGACAACCAGGAATGGGTGCAGAACGTACAATCTGGCAGCTACCGCGATTGGGTAGAGAAGAACTACGCAGGGCGCTCGGC
DNA Sequence for Gene
>EX27_RS25545
ATGAGGGTTCTGCTACTGGGCAAAGATGGTCAGGTAGGCTGGGAGCTGCAGCGTAGCCTGGCGCCGCTTGGTCAGGTGCTGGCGCTGAGCTCGCGCAGCC AGGCCCATTGTGGTGACCTGACGAACCTTTCTGGTCTGGCCGAAACCGTGCGCAGCTTCGCCCCTGATGTAATCGTCAATGCTGCCGCCTACACCGCCGT GGACAAGGCTGAAAGCGAACGCGAACAAGCGTTCAAGGTGAACGCCGAAGCCGTTGGTGTGCTGGCTCGCGCTGCTGCCGAGTGCGGCGCGTTGCTGGTG CATTACTCCACCGACTACGTGTTCCCTGGTGGGGGTAACCGTCCGTGGCGGGAAGACGATGAGACCGGCCCGCTGAACACCTATGGCGAAAGCAAGCTGG CCGGTGAGCAAGCCATCCAGGCAGCCGGCTGCCAGTACCTGGTCTTCCGTACCTGCTGGGTCTATGCGGCACGTGGCAATAATTTCGCCAAGACCATGCT GCGGCTGGCTGCGGAGCGTGACAGCCTGGGGGTGATCGACGATCAGTACGGTGCGCCTACCGGTGCTGAGCTGATCGCCGACATCACCGCGCATGCTATT GCCGCCACCCGCGCCAACCCGGCCCTGGTTGGCTTGTACCACCTGGCGGCAGGCGGCGAAACCACTTGGTGCGGCTATGCACGTTATGTACTCGAGCAGG CCGCCGCCCAAGGTGTGCAGTTGAAAGCCCATGCCGAGCAGGTCAAGCCGTTGACCACCGATGCCTATCCGACCCCGGCCAAGCGGCCGGCCAACTCGCG TCTGGATACCCATAAACTGCAGGAAGCCTTTTCCCTTAACTTGCCAGACTGGCGTGTAGGGGTGGCTCGCATGCTCACGGAAATACACGAGAAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCATCATGAAGCGTAAAGGCATCATCCTGGCAGGCGGGTCGGGTACCCGACTGCACCCCGCGACACTGGCAATCTCCAAGCAGCTATTGCCGGTGTACGA CAAACCGATGATCTACTACCCGCTGACCACGCTGATGCTGGCGGGCATCCAGGACATCCTGATCATTTCCACACCGCAAGACACCCCGCGCTTCGAGCAA CTGCTGGGTGATGGTCATCAGTGGGGCATCAACCTCACCTACGCCGTGCAAGCCTCGCCAGACGGCCTGGCGCAGGCGTTTCTGATCGGTGAAAGCTTCA TCGGCAATGATTTGTCCGCATTGGTGCTGGGCGACAACATCTATTACGGCCATGATTTCCAGGCGCTGCTGGGCAATGCCATGGAGCGTAGCGAAGGGGC GAGTGTATTCGCCTATCATGTTCAAGACCCCGAGCGTTATGGCGTTGTGGAGTTCGATGTACAGGGCAAAGCGATTAGCCTGGAAGAGAAACCGGCCAAG
Amino Acid Sequence
>dTDP-4-dehydrorhamnose reductase
MRVLLLGKDGQVGWELQRSLAPLGQVLALSSRSQAHCGDLTNLSGLAETVRSFAPDVIVNAAAYTAVDKAESEREQAFKVNAEAVGVLARAAAECGALLV HYSTDYVFPGGGNRPWREDDETGPLNTYGESKLAGEQAIQAAGCQYLVFRTCWVYAARGNNFAKTMLRLAAERDSLGVIDDQYGAPTGAELIADITAHAI AATRANPALVGLYHLAAGGETTWCGYARYVLEQAAAQGVQLKAHAEQVKPLTTDAYPTPAKRPANSRLDTHKLQEAFSLNLPDWRVGVARMLTEIHEK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site