Pseudomonas putida PD1, EX27_RS22340
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain PD1 EX27DRAFT_scaffold00012.12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCAAGCTGGCAGTCTTCGACGTGGACGGCGTGCTCACCGACGGGCGCCTGTACTTCCTCGAGGATGGCAGCGAATTCAAGACGTTCAATACCCTCGACG GCCAGGGCATCAAGATGCTCATGGCCTCGGGCGTGACCACCGCGATCATCAGCGGGCGCAAGACCCCCGTGGTCGAACGCCGGGCCAGTAATCTCGGCAT CCCGCACCTCTACCAAGGCCGGGAGGACAAATTGGTGGTGCTTGACGGCCTGCTCGCCGAACTGGGCCTAAGCTATGATCAAGTGGCTTACCTGGGCGAC GACCTGCCCGACCTGCCGGTGATTCGCCGAGTGGCTCTGGGCATGGCCGTAGCCAACGCCGCACCGTTCGTACGCCAGCACGCCCACGGCGTGACCCAGG CACGTGGCGGCGAAGGCGCGGCCCGTGAATTCTGCGAATTGATCATGCAGGCCCAGGGCACCCTGGACGCTGCCAACGCCAACTACCTGTAAGGCTGCCC
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| DNA Sequence for Gene |
>EX27_RS22340
ATGCTCAGCAAGAAAGCCCGAAACATTGTGCTGCTCGGGGCGATAGCCGCCCTGTTGGTAGCCATTGGCTACTGGAATGTCAGCCCGGAAAGCTTCCTCG ACAAGCCCGTGGCCCAAGTCGACGAAAGCGCCATCGATTACTACGCGATCAACGCCCACAGCGTGCAGTTCCTGCCCGACGGCAAGCTGCAATACGAAAT GACCGCCGACAGAATCGAACACCTCAAGACCAGCGAAGTCACCCAGGTGACCACACCGGACCTGCACCTGTACCGCGGCACCGAGTACCCGTGGCATGTG CAGAGCACGCGCGCCGAGGTCAATCCTGACGGTACCGAGGTCGAACTGATCGACAAGGTACGGATTGCCCGCACCGATGAAAGGCAGCGTGAAACCATCA TTACCAGCTCACGCATGACCGTGTTCCCGCAGAAGCAATATGCGCAGACCGAGCAAGCCGTTAGAATCGACGGCGCCGGAGGCACCACTACGGGCAAAGG CATGAAAGCGTATTTGAAAGAAGGCAAGATGGACTTGCTCTCTAACGTAAGAGGACAGTATGAGGCTCGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCCTCCCCCTTTTGCTCAGCCTGAGCGCAGCACTGGGAAGCGCGAGCGCCCTCGCCCTGCCGAACGACCGTGACCAGCCTATCCGCATCCAGGCCGAC AACGCTCACCTGGATGACAAACAAGGCGTGGCCACTTACACCGGCGACGTGATCATCACTCAGGGTTCGATGATGATCAAAGGCAACACCGTGACCATTA CCCGCTCCGCCTCTGGCGATATCGACGTAGTGACCTCGGTGGGCAACCTGGCCTACTTCGAGCAGCAGCAGAGCGCAGCCAAGCCGGACAAGATGAAAGG CTGGGGCGTAACCATCCAGTACCAGTCGCAGAAGGACTTGGTCATTCTCACCGACCGCGCCAAGGTCGAGAGCGAAGGCAATACCACCGAAGGCGAAAAG ATCGTCTACAACACTCAGACCCAGGTGGCGACCGCCGGCCGTGGTGGCAATGTGACAACACCCCGTCAGCGCATCGACATGGTGATCCAGCCCAAGAAGA
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| Amino Acid Sequence |
>hypothetical protein
MLSKKARNIVLLGAIAALLVAIGYWNVSPESFLDKPVAQVDESAIDYYAINAHSVQFLPDGKLQYEMTADRIEHLKTSEVTQVTTPDLHLYRGTEYPWHV QSTRAEVNPDGTEVELIDKVRIARTDERQRETIITSSRMTVFPQKQYAQTEQAVRIDGAGGTTTGKGMKAYLKEGKMDLLSNVRGQYEAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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