Pseudomonas putida PD1, EX27_RS04270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain PD1 EX27DRAFT_scaffold00009.9_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGAGGGCCCGACACCGATCTTGAACAGGTCGAACACGCTGATGGCCATTGTCGAATCACCTCTTGCTGGGCTTGTCTCTGCGCGCCATGCGCAGGGCGGG GTAGCTGCTAGGCTCAAACAGCGGGCCGCCTTGAATGCCAGCATCATCGGGCTTTTACCGCCCACCTCGCCGTCTGCAACCGACGTACTTTTGTCCAGCA GCGCCGCGCTGTTCTCAACCAGAAACTGCGCCCACCGCGCCGTTTTCCAGCGGCCTGGTGACGCAAAAATGCGCGCGAGGGGGTGGAAAAATCCATAAGC GACATCGCCCATACTGGATACGACCCGTTCCGTACTGGATACGACCCAACCAGTAGGCGATTGCCCGGAGCTGGAGGATTATCGAAAGCGACTCGTAAAG CACGGCCACGCATCCTGCCCTCTGCAGGCCTGGTCGACCGGACCCTCAGAAAGCCCGGCGACCCACGCGAACCCGAAGACAATATCTCAGGAGTCCATCC
DNA Sequence for Gene
>EX27_RS04270
ATGAAAGGTTCACCCTCGCTGTTACTGGTTGCGTTGCTGTCCGCGCCATTGCTGGCCCAAGCAGCCGAACCCGAGCAATGTCAGACTGTACGCTTCTCCG ATGTCGGCTGGACCGACATCACAGTCACGACCGCGACCACCAGCGTTGTGCTCGAAGCACTGGGTTACAAGACCCACACCACCATGATCTCGGTACCGGT GACCTACAAGTCGCTGGCCACCGGCAAGGACCTGGACGTGTTTCTCGGCAACTGGATGCCGACCATGGAGAACGACATCAAGCAGTACCGCGACGCCGGC ACGGTAGAAACCGTGCGCGCCAACCTGGAGAACGCCAAGTACACCCTGGCAGTCCCCCAGGCGCTGTACGACAAGGGCCTGAAGGATTTCAGCGACATAC CCAAGTTCGAGAAGGAACTGGACGGCAAGATCTACGGCATCGAACCGGGTAACGACGGTAACCGCACCATCCAGAGCATGATCGACAAAAACGCCTTTGG CTTGAAGGACGCCGGTTTCAAGATCGTGCAGTCCAGCGAGGCGGGCATGCTGTCGCAAGTTGACCGCGCGCAGAAACGCGGCGAGGCATTGGTGTTCCTG GGCTGGGAGCCACACCCGATGAACACCCGCTTCAAGATGCAGTACCTGACCGGCGGGGACGACTTCTTCGGCCCCGACTTCGGCAAGGCGACCGTGCTGA CAAACACCCGCAAAGGATACACGCAGGAATGCAGCAACGTTGGCCAACTGCTTAAGAACCTGTCGTTCGAGCTCAAGGATGAAAGCACCATGATGGGCTA TGTCCTGGACGACAAGATGAAACCCGAGGCCGCCGCCAAGAAATGGATCAAGGACAACCCAGGCAAGCTGGATGCCTGGCTGGCCGGCGTTACCACCGTT GATGGCAAGCCTGGCCTGGAGGCGGTCAAGGCCAAGCTTACGCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGAACTACGCAGTAGCGCTACCTCGGGGCAGGACCGTGCCTGCCCCGGGTTGATTTCAATCTATGCAGGTGGAAGCTCGCTATCATGCTTATCGATCAGA AAATACCTCTGGGCCAGTACATCGCGTCGTTCGTCGAATGGCTGACCCAGAACGGCGCGAATTACTTCGACGCCATCGCGCAAGGCCTGGAGTTCATGAT CCATGGCGTCACCAGCGCCCTGACTTTCTTCAACCCGTTCGTGCTTATCGCCCTGTTCGCCGCCCTGGCGCACTTCATCCAGCGCAAGTGGGCCCTGACC GCATTTGTCGCCCTGTCGTTCCTGCTGATCCTCAACCTGGGATACTGGCAGGAAACCATGGAAACCCTGGCGCAGGTCACCTTCGCCACGGTGGTATGTG TGGTGATCGGCGTGCCACTGGGCATCCTCGCCGCGCACAAGCCGATGTTCTATACCGCCATGCGCCCGGTGCTCGACCTGATGCAGACGGTGCCCACATT
Amino Acid Sequence
>glycine/betaine ABC transporter substrate-binding protein
MKGSPSLLLVALLSAPLLAQAAEPEQCQTVRFSDVGWTDITVTTATTSVVLEALGYKTHTTMISVPVTYKSLATGKDLDVFLGNWMPTMENDIKQYRDAG TVETVRANLENAKYTLAVPQALYDKGLKDFSDIPKFEKELDGKIYGIEPGNDGNRTIQSMIDKNAFGLKDAGFKIVQSSEAGMLSQVDRAQKRGEALVFL GWEPHPMNTRFKMQYLTGGDDFFGPDFGKATVLTNTRKGYTQECSNVGQLLKNLSFELKDESTMMGYVLDDKMKPEAAAKKWIKDNPGKLDAWLAGVTTV DGKPGLEAVKAKLTQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site