Pseudomonas putida PD1, EX27_RS04020

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain PD1 EX27DRAFT_scaffold00009.9_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCAACCCGGCCGCGCAGCACTCGTTCATCATCACTGAAGAGCTGGCGCCGACCATCAGCCTGGAAGACTTCAGCATCGACTGGGTCAAACAGCCGCCTG AGCCGCGCCTGAAGCGTGCACTGATCGCCGAGGTGGCGAAGATGACTGGCGGGATGCACCGCGCCGGGGTCAACCACCGCGATTGCTACATCTGCCATTT CCTGCTGCACACCGACCGACCGGTGACGGCGGATGACTTCAAACTGTCGGTGATCGACCTGCACCGCGCGCAAACCCGTGCCAGAATCAGCCGCCGCTGG CGCGACAAGGACCTGGCTGCGCTGTACTTTTCGGCCCTGGACATTGGCCTGACCCAACGCGACAAGCTGCGCTTCCTGCGCGGTTACTTCCAGCGTCCGC TGCGGCAGGTGCTGAAGGACGAAGCCGCGCTGCTCGCCTGGTTGGAGCGCAAGGCCCAGAAACTCTACGATCGCAAGCAACGCTATGGGGACGCACTCTG
DNA Sequence for Gene
>EX27_RS04020
ATGGCGAGTTGGACACTGGCGCCGGGGTACGAACACCTGGCGGCGGACTTCGGCAGCCTCGACGCGGTGTTCGCCCTCCAGGGCGAACGGCTGACCCGCG ACCCGCTCAGTGAGGTGGTACGCATCGAGCGTGACGGGATCAACTACTACGTCAAGCGCTACACCGGGGCCGGCAAGCACATGCGCCGGTACCTGGGGCG GCCACGCATCAAGGCCGAATGGCAAAACCTCAAGCAGTTCGCCAAATGGGGTATCCCCACTGCCGAAGTCGTGGCTTGGGGCCTGGAGCGCAACGGCCTG GCCTTTGGCCGTGGTGCTATGATCACCCGTGAACTGCCGCACACCGAAGACCTGTCGGCCCTGGCCGAACACAACGATGCGCGCTTGGCCGACCGCGCCT GGGTCGACCATGTCAGCCGTCAACTGGCGCGCCATACCCGGGTCATGCACCAACACCGCTTTGCCCATAACGACCTGAAGTGGCGCAACCTGCTGGTCGA TGACCAAGGCACGCTATTCTTCATCGACTGCCCTACCGGCGACTTCTGGCGCGGTTTCATGTGGCGCCACCGGATGATCAAGGACCTGGCATGCCTGGAC AAAGTGGCCAAATACCACCTGTCAGCTACCCAGCGCCTGCGCTTCTACCTGCAATACCGTGGCCGCGACCGGCTGAATGTGCGTGACAAAAAGCGCATTC ATCGGGTACTGGGCTTTTTCGAGGGAAGGGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGATTACCTGGCCAGCGCGGACCTCGCGCTGCTCAAGCGCCATGGCCTGGACAACTTCGAGGCGCTGTGGGCGCTGCAACTTGATGCTGTGGACGAACC CAACACCGGCCGTGGTGGCTGGAGCAGCGTCTTCCGTCTGGAACTCGAAGGCAAGGGCTACTACCTCAAGCGCCAGAGCGACTACTTGACCCGTACCTTG CACCGGCCGTTCGGCGAGCCCACCTTCGCCCGCGAATTCCGCAACATCAGTCGCTACCAGAAGCTGCGCATTCCGGCATTGCAGGCGGTGTTCTACGGCG AGCGCAAGCAGGGCGGCAAGCACCGGGCTATCCTGATGACCCGCGCTCTGGACGAATGGGCCGACCTCGACAGCCTGCTGGCGCAGTGGCCGCGGTTGGG TGAAGCCGAGCGCACTGGCATCCTGCAGGCCTGCGGTCAGCTGGCGCGCACCCTGCACAGCGCCGGCCAGGTGCATGGTTGCTTCTACCCCAAGCACATT
Amino Acid Sequence
>LPS kinase
MASWTLAPGYEHLAADFGSLDAVFALQGERLTRDPLSEVVRIERDGINYYVKRYTGAGKHMRRYLGRPRIKAEWQNLKQFAKWGIPTAEVVAWGLERNGL AFGRGAMITRELPHTEDLSALAEHNDARLADRAWVDHVSRQLARHTRVMHQHRFAHNDLKWRNLLVDDQGTLFFIDCPTGDFWRGFMWRHRMIKDLACLD KVAKYHLSATQRLRFYLQYRGRDRLNVRDKKRIHRVLGFFEGRE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site