Pseudomonas putida PD1, EX27_RS19360
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain PD1 EX27DRAFT_scaffold00008.8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTACCGGTGCAGGTGGGTGGCAATAACGTGCCCGGCGGTAGCGGTGGCAGTTTCTTGCAGGTAGGCGCGTTCGCCAACCCGGACGCTGCCGAGTTGCTG CGCGCCAAGCTCAGCACCATGGTCAATGCACCCGTGTTCATCAGCTCGATCGTGCGTAACCAGCAGACCCTGCACCGCGTGCGCCTGGGGCCGATCGGCA GCCAGGGCGAGATCCAGCAAGCACAGGACAGCATTCGCCTGGCGAACTTGGGGCAGGCAAAGCTGGTCACAGCAGACTGACTGTGGGGGCGGGCGCGCCT GCGAAGACGGCAACACCAAACTATCGGTTTTGTCATGAATTGCCGGTCGCGGCCATGTACAATGACCGCTTTTGCCCGCAGCGACATAAAGCCGCACGTT CGCGGGCCAGGCCATTGGCCATAAAACTAGACTGACTGGCGCTGGGCACATGATCTTGCCCAGGGAACATCTCAGACCATTAGCGATTTTCGAGAGACGG
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| DNA Sequence for Gene |
>EX27_RS19360
ATGAACATCACCAACCTTGCCAAACGACTTTGCCTGCCTGTACTGCTGCTGATCACGCCTGCCGCCTTCGCGGCGGAGCAGATGACGCCTGCGCCACCCC AACTGGCAGCCAAGTCCTACGTACTCATGGACGCGTCCAGCGGCAACGTGCTGGTCGAGAACAACGGTGACGAGCGCCTGCCGCCAGCCAGCCTGACCAA GCTGATGACCGCCTACATCGCCACCCTGGACATCCGCCGCGGCCAGATCGGTGAAAGCGACCCGGTTACTGTCAGCGAAAACGCATGGCGTACCGGCGGT TCGCGCATGTTCATCAAGGTTGGCAGCCAGGTCACGGTCAGCGACCTGCTGCACGGCATCATCATCCAGTCCGGTAACGACGCCTCGGTCGCCTTGGCCG AGCACATCGCCGGCAGCGAAGACGCCTTTGCCGACATGATGAACAAGACGGCTGCCGACCTGGGCATGACCAACAGTCACTTCATGAACCCGACCGGCCT GCCGAACCCCGAGCACTACTCGTCGGCGCACGACATGGCAACCCTGGCCCGTGCGATCATCAATGTCGACCCGGCCCACTACGCCATCTACTCGCAGAAA GAGTTTTTCTGGAACAACATCAAGCAGCCTAACCGCAACCTGCTGCTGTGGCGCGACAAGACCGTCGATGGCCTGAAAACCGGTCACACCGACGAAGCCG GCTACTGCATGGTGGCGTCGGCCGTTCGTGACGGCCAGCGCCTGATCGCCGTGGTGTTCGGTACCAACAGCGAACAATCGCGTGCTGCCGAAACCCAGAA GCTGCTGACCTACGGTTTCCGCTTCTTCGAAACCCAGACCTTCTACCAGAAGGGCACCGAGCTGACCCAGGCCCCGGTCTGGAAGGGCGCTACCAGCCAG ATCAAGGCTGGCCTGGCTGACGACCTGACCATGACTATGCCTAAAGGCCAATTGAAGCGCCTGCAGGCTTCGATGACCATGAACCCGCAGCTCACCGCAC CGATCGCCAAAGGTGACGTGATCGGCAAAGTGGAAGTCAAACTGGACGAGAAAGTGGTTCACAGCGCCGACCTGATTGCCCTTGATGGCGTCGAGGAAGG TGGTTTCTTCCGCCGTATGTGGGATAGCATCCGTCTATTCTTCTACGGGTTGTTCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TACGTGACCTGCATGCCCCCGCGCCTACCGCGGGGGTGTTGTTGTTGCCACGGCTTACGAGGCCGTTTCCGCCATGAGCGAACCAGACGTCAAGTCGCAC AAGATCGAATTCCCTTGCGACGATTACCCGATCAAGGTCATCGGTGACACCGTTGTCGGTTTCAAGGACACGGTCATCGAGATTCTCAGCAAGCACGCCA AAGTCGACCTTTCCACCCTGGCCGAACGCCAGAGCAAGGAAGGCAAGTACACCACCGTGCAATTGCACATCGTTGCCGAAAGCGAGAACCAGTTGCACGA TATCAACAGCGCCCTGCGCGCTACCGGCATCGTGAAAATGGTGCTTTGATGTCCGCCTGCCTCGGTTTTCGCGAGCTTGGCCTGCAGCCCTATGAACCGG TGCTGGAGGCCATGCGTCGTTTTACCGAGCAGCGCAGCCCGGACAGCCAGGATGAAATCTGGCTGGTCGAGCACCCTGCGGTCTTCACCCAGGGGCAGGC
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| Amino Acid Sequence |
>D-alanyl-D-alanine carboxypeptidase
MNITNLAKRLCLPVLLLITPAAFAAEQMTPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTKLMTAYIATLDIRRGQIGESDPVTVSENAWRTGG SRMFIKVGSQVTVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPNPEHYSSAHDMATLARAIINVDPAHYAIYSQK EFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVASAVRDGQRLIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELTQAPVWKGATSQ IKAGLADDLTMTMPKGQLKRLQASMTMNPQLTAPIAKGDVIGKVEVKLDEKVVHSADLIALDGVEEGGFFRRMWDSIRLFFYGLFN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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