Pseudomonas putida PD1, EX27_RS19340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain PD1 EX27DRAFT_scaffold00008.8, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAATAAGGAAAGCGCTGTGCGTCTGCGCCTGATTGCGGTCGGCTCGCGCATGCCGAAGTGGGTCGAGGAAGGCTGGCATGAATATGCCAAGCGCCTGCCC GCCGAGCTGTCGCTGGAGCTGGTGGAAATCCCGCTGAATACCCGTGGCAAGAATGCCGACGTCGCCCGCCTGATCCGTCAGGAGGGCGAAGCCATGCTGA GCAAGGTGCAGCCTGGGGAACGCATTGTCACCCTCGAGGTCCATGGCAAGCCCTGGAGTACCGAACAGCTGGCCACCGAGCTGGACCGCTGGCGCCTGGA TGCGCGCACGGTGAATTTGATGGTGGGTGGCCCGGAGGGCCTGGCGCCTGAGGTTTGCGCACGCGCCGAGCAACGTTGGTCGCTGTCGCCGCTGACTTTG CCGCACCCGTTGGTAAGGATACTCATCGGCGAGCAGATCTACCGCGCCTGGACCGTGTTGTCCGGGCACCCTTACCACAAATGAGCCTGTAAGCAGTCCA
DNA Sequence for Gene
>EX27_RS19340
ATGTCGCAGCCGATCCGTCTCAAGGACCACGAGAAAGACGCCCGCCTGGTGCGCAACCGCGTCGTGGTCGGCGCAGTCGCGATCATGCTGCTTGTGTGCG TGTTGATCGCACGGCTGTACTACCTGCAGATCATCCAGTACGACTACCACTCCACGCTGTCGGAGAACAACCGGGTGCATGTGCAGCCGATCCCGCCGAC CCGCGGGTTGATCTTCGACCGCAACGGGGTGATCGTTGCCGACAACCGGCCCAGCTTCAGCCTGTCGATGACCCGCGAACGTGCGGGTAACTGGCAGGAA GTGCTGGATACCATCGTCGAAGTGCTTGAGCTCACCGCTGACGACCGTGCCCTGTTCGAGAAGCGCATGCGCCAAGGCCGCCGGCCATTCGAGCCGGTGC CGATTCTGTTCGAGCTCAACGAAGAGCAGATTGCCCGCGTGGCGGTAAACCAGTTCCGCCTGCCGGGTGTCGAGGTGGTGGCCCAGCTGGTGCGGCATTA CCCGCAGGGTGCGCATTTTGCCCATTCGGTGGGTTATGTAGGGCGGATCAACGAGAAAGAGCTGAAAACGCTCGACCCGGTGAACTACAGCGGTACCCAC CATATCGGCAAGACCGGCATCGAGCGCTTCTACGAGGCCGCCCTGCACGGTCAGGTGGGTTACGAGGAAGTCGAGACCAACGCCCGTGGCCGTGTGCTGC GGGTGCTCAAGCGCACCGACCCGAAGCCGGGCAAGGACATTGTGCTGAGCCTGGACATCAAGCTGCAGGAGGCCGCTGAAGCCGCCCTGGGAGGCCGGCG TGGTGCAGTGGTTGCGCTCGACCCGCGCACCGGCGAGGTACTGGCGATGGTGAGTCAGCCTAGCTTCGACCCCAACCTGTTCGTCACCGGCATCAGCTTC AAGGCCTATGCCGAATTGCGCGATTCGATCGATCGGCCGCTGTTCAACCGCGTGCTGCGTGGCCTGTACCCGCCGGGGTCGACCATCAAGCCGGCGGTGG CTATTGCCGGTCTGGACAGTGGCGTCGTGAATGCCAGCAGCAGGGTGTTCGACCCTGGCTACTACCAGTTGCCCAACTACGACCATAAATACCGTAACTG GAACCGTTCCGGTGATGGCTGGGTCGACCTGGACACCGCCATCATGCGCTCGAACGACACCTACTTCTATGACCTTGCGCACAAGATGGGCATCGATCGG TTGTCCAGCTACATGAACAAGTTCGGTATCGGCCAGCGGGTTTCCCTCGATATGTTCGAGGAATCTGCCGGGTTGATGCCGTCGCGCGAATGGAAGCGTG CCACCCGTCGCCAGGCCTGGTTCCCTGGCGAAACCCTGATTCTCGGCATCGGCCAGGGCTATATGCAGGCTACGCCGCTGCAACTGGCCCAGGCCACTGC ACTGATCGCCAACAAAGGTGTGTGGAACCGCCCACACCTGGCCAAGACCATCGAAGGCCTGCCGCCGGTGGACGACAACCCCATGGAAGACATCGTGCTG CGTGACAAGTCCGACTGGGCCAAGGTCACCCATGGCATGGAACAGGTGATGCACAACGCCCGCGGTACCGCGCGCAAGGCAGCAGCCGGTGCCCAGTACC GCATTGCCGGCAAGAGCGGCACCGCCCAGGTGGTGGCGATCAAGCAGGGCGAGAAGTATGACCGCAACAAACTCCAGGAGCGCCACCGCGACCATGCCTT GTTCGTCGCGTTTGCCCCAGCCGAAGCCCCGAAAATCGTGGTTTCGGTGATGGTCGAGAACGGTGAGTCCGGCTCGGGTGTCGCCGCTCCGGTGGTTCGC CAGATCATGGACGCCTGGCTGCTCGACGAAAACGGCCGGCTCAAACCCGAGTTCGCGCCCGCCACCGTTACCCAGGAATCGGCCCTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAACAATTTCGATCGCATGCTCTCCAGCGAGGATGTGATGCGTCGGCGTGCGAGCTTTCTGCAACGCATTCATATCGACGGCCCCTTGCTGATCATTCT GCTGACCCTTGCGGCCGGCAGCCTGTTCGTACTGTATTCGGCCAGTGGCAAGAACTGGGACCTGCTGCTCAAGCAAGCCACCTCGTTTGGCATCGGTCTG GTGTCGATGTTCGTCATCGCCCAGCTGGAGCCGCGCTTCATGGCGCGTTGGGTGCCGCTGGCCTACCTGGCCGGGGTGCTGTTGCTGGTAGTGGTGGATG TGATGGGCCACAACGCCATGGGTGCCACGCGCTGGATCAACATTCCGGGGGTGATCCGCTTCCAGCCCTCGGAATTCATGAAGATCATCATGCCGGCGAC CATCGCCTGGTACCTGTCCAAGCGCACCTTGCCGCCCCATTTGAAGCACGTGGCGATCAGCCTGGTGCTGATCGGCGTGCCGTTCATGCTGATCGTACGT
Amino Acid Sequence
>penicillin-binding protein 2
MSQPIRLKDHEKDARLVRNRVVVGAVAIMLLVCVLIARLYYLQIIQYDYHSTLSENNRVHVQPIPPTRGLIFDRNGVIVADNRPSFSLSMTRERAGNWQE VLDTIVEVLELTADDRALFEKRMRQGRRPFEPVPILFELNEEQIARVAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYVGRINEKELKTLDPVNYSGTH HIGKTGIERFYEAALHGQVGYEEVETNARGRVLRVLKRTDPKPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPRTGEVLAMVSQPSFDPNLFVTGISF KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVNASSRVFDPGYYQLPNYDHKYRNWNRSGDGWVDLDTAIMRSNDTYFYDLAHKMGIDR LSSYMNKFGIGQRVSLDMFEESAGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALIANKGVWNRPHLAKTIEGLPPVDDNPMEDIVL RDKSDWAKVTHGMEQVMHNARGTARKAAAGAQYRIAGKSGTAQVVAIKQGEKYDRNKLQERHRDHALFVAFAPAEAPKIVVSVMVENGESGSGVAAPVVR QIMDAWLLDENGRLKPEFAPATVTQESAL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site