Pseudomonas putida PD1, EX27_RS03290

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain PD1 EX27DRAFT_scaffold00006.6_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGTGCGGTGGCGCTGAACCTGCGTGATGCCGCCGCCCTGGAAGCTGCACTGTTGCAGATGCGCCAGCGCATCGCTGCCTACGCCCCGCACGTCGCGTTC GACCAGGTACTGCTCGAACCCATGGCCGAGCCGCCGCTGGCCGAGCTGATAGTGGGCATCAAACGTGAACACGACTTTGCCCTGGCCTTGGTGATCGGTG CCGGCGGCGTGCTGGTCGAACTGCTCAAGGACAGTGTCAGCCTGTTGTTGCCCACCACCGACAGCGCCATCCGCGCCGCACTGCTGAACCTGCGCAGTGC CAGCCTGCTGCAAGGCTTCCGTGGCCGCCCGGCTGCCGACCTCGACGCCTTGGTCGCAGCTATCCGTGCGGTGGCCGACTACGCCTGCGAAAACGCCGGG CAGCTGTTGGAGCTGGATGTGAACCCATTGATGGTCGGTGCCCTTGGCACCACCGCGGTCGACGCGCTGATCCGCCTCGGCCAGGCGCAAGGAGAACGAC
DNA Sequence for Gene
>EX27_RS03290
ATGAATGACCTTACCCTGACAGCCGGCCAGGCGCTGGTGCGGTTGTTGGCCAACTACGGTGTGGAGACCGTGTTCGGCATCCCTGGGGTGCACACCCTGG AGCTGTACCGTGGCCTGCCGGGCAGTGGCATTCGCCATGTACTGACCCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTATGCGCGGGTCAGTGG CAAGCCTGGGGTGTGTTTCGTCATTACCGGCCCAGGCGTGACCAACGTCGCCACCCCCATCGGCCAAGCCTATGCCGACTCGGTGCCGATGCTGGTGATT TCCAGCGTCAACCACACCGCCAGCCTGGGCAAGGGCTGGGGCTGCCTGCATGAAACCCAGGACCAGCGCGCCATGACTGCGCCCATCACGGCGTTTTCTG CGGTGGCCCTGCAGGGCGACGACTTGCCCGAGCTGATCGCTCGCGCCTGGGCAGTGTTCGACAGCGAACGGCCGCGCCCGGTGCACATTTCGGTGCCGCT GGACGTGCTGGCGGCATCGGTCAGCCGGGACTGGAGCGACGAGGTGGTACGCCGTCCTGGGCGTGGCCAGCCGTGCCGCGAAACCCTCGAGCAGGCTGCC CTGAAGCTTGCCGCCGCCCAGCGGCCGATGATCATTGCCGGGGGTGGCGCGTTGCACGCGGCTGAGCAGTTGCAGCAACTCAGTACACGGCTGGCAGCGC CTCTGTTCACCAGCGTGGCCGGCAAGGGCGTGCTGCCACCAGACGCGCCACTCAATGCCGGCGCCAGTCTGTGCGTCGAACCCGGCTGGCAACTGATCAG CCAGGCTGATGTGGTGCTTGCCGTAGGCACCGAAATGGCCGACACCGACTTCTGGCGCGAGCGCCTGCCGATCACTGGCGAGCTGCTGCGCGTGGACATC GACCCGCGCAAGTTCAACGACTTCTACCCCTGTGCCATTGCCCTGCAGGGCGATGCCCGGCAAACCGTGGACGGTTTGCTCGAACACCTGCCTGCACTCG ACCGAGACCCTGCTCAGGCGAGCGAAGCGGTGAGCAACCTGCGCCAGGCCATTCGTCATGGGCATGCACCGTTGCAGGCCACCCATCAGGCGATTCTTGA CCGCATTGCCGCCGTGCTGCCCGACGATGCGTTCATCAGCAGCGACATGACCCAACTGGCCTACACCGGCAACTACGCCTTCGCCAGCCGGGCGCCGCGC AGCTGGCTGCATCCTACCGGCTACGGCACACTCGGCTACGGCCTGCCGGCCGGTATTGGCGGCATGCTTGCCACCGACCATCGCCCAGGCCTGGTGCTGG TGGGCGACGGCGGTTTCCTTTATACCGCCCAGGAGCTGGCCACGGCTGTAGAGGAACTGGACCGGCCGTTGGTGGTGCTGCTGTGGAACAACGACGCCCT CGGGCAGATCCGCGATGACATGCTCGGCCTGAACATCGAGCCGGTCGGCGTGCTGCCGCGTAATCCGGACTTCATCGGCCTGGCCCGTGCCTTTGGTTGC GCGGTGCGCCAGCCGCGTGATCTGGACGCGCTGCAGGCCGACCTGGCCAGCGGTTTCGCCACACCCGGCGTGACCTTCATCGAACTCAAACACACCTGCG TCTGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGCGAACAACCAAAAGAACAAGAGAAACCCACATGCCATTTCGCCGTACACTTCTGGCCGCATCCCTGGCCCTGCTGATCACCGGCCAAGCCCCACTG TATGCCGCCCCCCCGCTGTCGATGGACAACGGTACCAACGCCCTGACCGCGCAAAACAGCAATGCCTGGGTCGAAGTCAGCGCCAGCGCCCTGCAGCACA ACATCCGCACGCTGCAGACCGAGCTGGCCGGCAAGTCCAAGCTGTGCGCCGTGCTCAAGGCCGATGCCTATGGCCACGGTATCGGCCTGGTAATGCCATC GATCATCGCCCAGGGCGTGCCCTGCGTGGCGGTGGCCAGCAACGAGGAGGCCCGCGTGGTCCGCGCCAGTGGCTTCACCGGGCAACTGGTGCGGGTACGC CTGGCCAGCCTCAACGAGCTGGAAGATGGCTTGCAGTACGACATGGAAGAGCTGGTGGGCAGCGCGGAATTTGCCCGCCAGGCCGATGCCATCGCCGCGC
Amino Acid Sequence
>decarboxylase
MNDLTLTAGQALVRLLANYGVETVFGIPGVHTLELYRGLPGSGIRHVLTRHEQGAGFMADGYARVSGKPGVCFVITGPGVTNVATPIGQAYADSVPMLVI SSVNHTASLGKGWGCLHETQDQRAMTAPITAFSAVALQGDDLPELIARAWAVFDSERPRPVHISVPLDVLAASVSRDWSDEVVRRPGRGQPCRETLEQAA LKLAAAQRPMIIAGGGALHAAEQLQQLSTRLAAPLFTSVAGKGVLPPDAPLNAGASLCVEPGWQLISQADVVLAVGTEMADTDFWRERLPITGELLRVDI DPRKFNDFYPCAIALQGDARQTVDGLLEHLPALDRDPAQASEAVSNLRQAIRHGHAPLQATHQAILDRIAAVLPDDAFISSDMTQLAYTGNYAFASRAPR SWLHPTGYGTLGYGLPAGIGGMLATDHRPGLVLVGDGGFLYTAQELATAVEELDRPLVVLLWNNDALGQIRDDMLGLNIEPVGVLPRNPDFIGLARAFGC AVRQPRDLDALQADLASGFATPGVTFIELKHTCVC
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site