Pseudomonas putida PD1, EX27_RS02015

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain PD1 EX27DRAFT_scaffold00006.6_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCTTGGCGCTCTCCACCGCCAGAAGGGGGCAGTCGACAAGCTGGTTACCTGCACATGAACGGCACGGCAATCATGAACTTTGCATTGAACGGTGTCCCGC CGGCAATCGAGGAGCTCTTGCTTCACTGCGGCCTGACGTTGGAAGACGTGCCCATACTGGCGCTGCATCAGGCCAACGGCTTCATGCTCAATTATCTGCG CAAGTTGCTGGGCGTCGAACGCGCCAAAGTGCCGATCAATATGCGCGAGGTAGGTAACACCGGCCCGTCGTCGATCCCGCTGTTGCTCGCATCCTTACCA GCGGCTGACTGGCCGCAGCGCGAGCACGTAGTGTTATGTGGCTTTGGCGTCGGCTTGTCGCTGGGCGCCGCTCGGGTCGACCTCAGCAGTACACACTTCT ACGAACCGGTCGAGGTGCCTCAGGTCGCTGCCTGAGTCGCATCTGACAGCGGTACTTCAAAGACCTTTTGCCCCCGGAGAGGGGGCTGGGAATCAGGGTA
DNA Sequence for Gene
>EX27_RS02015
ATGAATGGATTTCAACGGCGCGCAGACATCGATGGGCTGCGCGCGCTGGCAATTCTCTCGGTCATGGCATTTCACTTCAACGCGGCCTGGTTGCCGGGCG GTTTTGCTGGAGTGGATGTGTTTTTCGTCATATCTGCCTATCTGATCACCCGCATCATCACATCGGCGATCAACGACGGCACCTTCACATTCACAGGTTT CTATGCCCGCCGCGTCAAGCGGATTTTCCCGGCGGCTTTTCTGGTATTTCTGGTCAGCGTACTGGCTGCCAGCCAACTGAACAGCATGTTGCTGCCTGCA GCGAAGTTCGTGCTCTTGTCGCTGTTCAACCATTTCACGAGTGATTATTTCACTCAGGATACTCAGCAGAATTTCTTCTTGCACTATTGGTCGCTGTCGA TTGAGGAGCAGTTCTACTTCATTTGGCCAGCTTTGCTGGTGGCTGGCAGCTGGGTGGCCGGCCGCTGGCTGGCGCCGGCTCAGCGCACGCGGGCGTTGAT GGTCGGGTGCATGGTGATCGGCGTACTGTGTTTTGCCCTGGGTGAATACTGGGTGCGTGACGCTGGGCAGCAAGCGGGCGTGTACTTTTTCTCGATCCCA CGCTTCGGTGAAATGGCGTTGGGCGCATTCATCGCCTTGGCGCCGACATCTAAGGTCCAGGCGCGTTCACGCCTTGAGGTTTTGTCCTTGCTCGGCGGGC TGTTGCTGGGTTGCAGTTTCCTGTGGTTGGCAGAGCAGCCATACCCCGGCTTGCACGCACTGGCTCCGTGCTTAGGTACGCTGCTGCTGATCCGATATGG GCGAACCACCGACGGCGAGCTTTCGACGATTGCCCGGGTCTTGGCCTGGCGCCCGCTGGTGGGCATCGGCCTGATCTCATACTCACTGTACCTGTGGCAT TGGCCTGTGCTGGCAATCGCACGCTTTGTTGAGGGCGACAACGACTTGTCGATGGGCATGATGGCCTGCTTGCTGGTGCTGATCGTGGCGCTTTCAGTAC TGACCTACTTGGGTGTAGAGCGCCCTTTGATTCGTTCCAGGCTTGGGTTCAAGGCCGCCTTCACGGGTTTTGCCGGGCTTTCCATGGGGTCTTTTACACT GATCGTGGCTATGACCGGCCTGGAGGCATTGAACTTGCCCCCGATAATGGGTGAGCGGTATACCAACCTGACGGTCAATGGCCAGAACATCCATATGACC GAAGGCTGGGTAGCGCCCTGCTGGGAAGTGAATGACCTGGATCCCAGCAAGGCCGCCGTGGATGAGCGCTGCCACATCGGCGCGCATTCCTCCGAGCAGG TCTTGATGGTAGGTGACTCCCACGGTGCGGCATTGGGCGGTTTCATCGACACCCTCGCGAAAGCGGAAGGCTTTTCCGTTACGGCATATGAAGTGGGTGG CTGCCAAGTGGCCGAGTGGGGTATGGCCAAGCGCGTACCGGCTATCGTGTTGACGGATGAACGCCGCGCCAAATGTGCAGCGATGCTTGATTTCATTGAG CAGAATCATGCCCGCTACAAAGCCATTTTCGTGGTTAACGCTTTCAACCTATTTGCCGGTGCATACGATGTACTTAAAAAGGTCGATGGCGTACCGGTGG ACTTGAATGAGGAGCGCCTGCATAGGTTTGCGGCGAAGACACCGTTGTACTTCTTCCACGATGCGCCAGTGCTCGACCGCTCGATGCAACATTCGCCTCT GCTCAGTCGTCTCGGTCTGCGCTTGGGCGCTGCTCCTGTGGAGCATGGCGCGCAAGGCAACCTCCAGGTAAAGGCGATGGTGGCTCGGATAGCGAACGCT CACTGGGTCGACTTGGCTGCGGCTTACCAAGTGCTTCAGGACAGCAGTTTCCTGCATGACGGTCTGCCTGCCTATGCCGACACCAATCACCTGAGTGGTC GTGGTGCGCTGGCGCTGGCTGGGGTCTTCCAGGCTCAGGGCGGGTGTCTGCTGTGTACCTCGGTTAAGGCTGGCAAGGACGGGATGGCGTTGTCAGGGGC GGCGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCTACGGCAGGGCAATGTCGTGGGCGACGAGATTTCCCGCCCATGGCTTAACGGGCAAAGGAGCTTCATATGAAAACTGAACAAGGCAAGCATCACGTG GTAGTGGTCGGCGCCGGGCCAGTCGGCTTACTGACCGCCTACTTGTTACGGCGTATGCAGGTCGATGTGACGCTGTTAGAACGGCGTCACTCGCGCTCCA CACAGTCCAAGGCGTCCTCGATGAACGCTTACTCGCTGGCAATCATGGACATGGTCGGGTTGGCGGACGCCTTCATCGAACAGGGAATGCCGATTCACGA CCTGTTGGTCTACTGGAACAATCGGCGCACGATGCATGTGAACTATCGCCACTTGCCATCGGTTCATGACTACATTCTCGGCATTTCCCAGCCCGAGACC GAAGCTGTGCTTGAGCATGCCTATCGAGACCTGGGGGGGAGCCTGCAACGAGGCAGCAGCGTGACTGCATTGACGCCCACCGAGCAGGGGGTCGAGGTGG
Amino Acid Sequence
>hypothetical protein
MNGFQRRADIDGLRALAILSVMAFHFNAAWLPGGFAGVDVFFVISAYLITRIITSAINDGTFTFTGFYARRVKRIFPAAFLVFLVSVLAASQLNSMLLPA AKFVLLSLFNHFTSDYFTQDTQQNFFLHYWSLSIEEQFYFIWPALLVAGSWVAGRWLAPAQRTRALMVGCMVIGVLCFALGEYWVRDAGQQAGVYFFSIP RFGEMALGAFIALAPTSKVQARSRLEVLSLLGGLLLGCSFLWLAEQPYPGLHALAPCLGTLLLIRYGRTTDGELSTIARVLAWRPLVGIGLISYSLYLWH WPVLAIARFVEGDNDLSMGMMACLLVLIVALSVLTYLGVERPLIRSRLGFKAAFTGFAGLSMGSFTLIVAMTGLEALNLPPIMGERYTNLTVNGQNIHMT EGWVAPCWEVNDLDPSKAAVDERCHIGAHSSEQVLMVGDSHGAALGGFIDTLAKAEGFSVTAYEVGGCQVAEWGMAKRVPAIVLTDERRAKCAAMLDFIE QNHARYKAIFVVNAFNLFAGAYDVLKKVDGVPVDLNEERLHRFAAKTPLYFFHDAPVLDRSMQHSPLLSRLGLRLGAAPVEHGAQGNLQVKAMVARIANA HWVDLAAAYQVLQDSSFLHDGLPAYADTNHLSGRGALALAGVFQAQGGCLLCTSVKAGKDGMALSGAAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site