Strain | Pseudomonas putida strain PD1 EX27DRAFT_scaffold00005.5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGCGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAG AAGCCCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAATTCCAGCACGCCGCTGCACCGGGCCTGGAAAGTGAGCAACTGAGCGAGGAGGG TGCCGAAGTAGCGGTAGCCTCGGCGCCAGTACGCAATGACCAGAAGCTGGGCCGCAACGAGCCGTGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGC CATGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAGGTACCGCGCTCG TCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGCGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTA
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DNA Sequence for Gene |
>EX27_RS15495
|argJ
ATGGCTGTTGGTCTTGGTCCTTTGCCCACCCTGCACCCGGTTCCGGGTTTTGAACTCGGTATCGCTTCTGCCGGTATCAAGCGCCCGGGGCGCAAGGATG TGGTGGTCATGCGCTGTGCCGAAGGCTCCAGCGTGGCTGGCGTGTTCACCCTCAACGCCTTCTGCGCAGCGCCGGTGATCCTGTCCAAGCAGCGTGTACA GGGCACCGTGCGCTACCTGCTGACCAACACGGGTAACGCCAATGCTGGCACCGGCGCGCCAGGCCTGGCCGCCGCCGAGCGCACCTGCGCCAAGCTGGCC GAACTGGCTGGCGTACCGGCAGAGTCGGTACTGCCGTTCTCCACCGGCGTGATTGGCGAGCCGCTGCCGGTCGAAAAGATCGAAGGCGCGCTGCAGGCCG CCCTCGACAACCTGTCGGAGAACAACTGGGCTGAGGCCGCTACCGGCATCATGACCACCGACACCCTGCCCAAAGGGGCCAGCCGCCAGTTCCAGCACGA TGGCGTGACCGTTACCGTCACCGGTATCAGCAAGGGTGCAGGCATGATCCGCCCGAACATGGCGACCATGCTGGGCTACATCGCCACCGACGCCAAGGTG GCGCCAAGCGTCCTCAAGGACCTGATGCTGGACGGCGCCAACAAGTCGTTCAACCGCATCACGATCGATGGTGATACTTCGACCAACGATTGCTGCATGT TGATCGCTACCGGCAAGGCCGACCTGCCGGAAGTGACTGAAGCCAGCGGCGCGCTCTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGT GGCCCAGGCCATCGTCCGTGACGGCGAAGGCGCGACCAAGTTCGTGACCGTGCAAGTCAACGGTGGTGGTAACCACCAGGAGTGTCTGGACGTCGGCTAC GCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGTCGTATCCTCGCTGCCGTAGGCCGTGCCGGTGTACCGGAGC TGGATGTGAGCCTGATCGATGTTTACCTGGACAGCGTTTGCATTGCGAGCAAAGGCGGCCGCAGCCCGAGCTATACCGAAGCGCAGGGTTCGGCAGTGAT GGCCCAGGAAGAGATCACCATCCGAATCGAACTGGGCCGTGGCCAGTGCAGCGAAACCATCTGGACGACCGACCTGTCCCACGAGTACGTGAAGATCAAC GCCGAGTACCGTACCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCTACTGATCCGAAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTTGCAATGCCTGCAGGAGCGGTGCGGTCCCTGTGGGAGCGGGCTTGCCCGCG AAAGGCCGCGCAGCGGCCTGCGGGTTTTGCAATACAAACCTGATGGAGCCGAACCATGAGCTATCACCTGATCATCGGCGACAAGCTGTACTCCTCCTGG TCGCTGCGTGGCGCCCTGGCCCTCGAGCTGGCTGGCGTGCCCTACGAAGAAACCCTGATCAAGCTGAACCAGCCTGATACCCGCCAGCGCATCCTCGCTT TCTCCTCCACCGGCAAGGTGCCGCTGCTCAAGAGCGAGCACGGTGTGATCGCTGACTCGCTGGCCATTGCCGAATACCTCAACGAACGCCACCCCGAAGC CCAGCTGTGGCCTGCCGATGTGGCGGCGCGTGCCCAGGCCCGTTCGGCCTGTGCGCAGATGCATAGCGGCTTCTTTGCCCTGCGCGGCGCCATGCCGTTC
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Amino Acid Sequence |
>N-acetylglutamate synthase
MAVGLGPLPTLHPVPGFELGIASAGIKRPGRKDVVVMRCAEGSSVAGVFTLNAFCAAPVILSKQRVQGTVRYLLTNTGNANAGTGAPGLAAAERTCAKLA ELAGVPAESVLPFSTGVIGEPLPVEKIEGALQAALDNLSENNWAEAATGIMTTDTLPKGASRQFQHDGVTVTVTGISKGAGMIRPNMATMLGYIATDAKV APSVLKDLMLDGANKSFNRITIDGDTSTNDCCMLIATGKADLPEVTEASGALFEALKKAVFEVCMEVAQAIVRDGEGATKFVTVQVNGGGNHQECLDVGY AVAHSPLIKTALFASDPNWGRILAAVGRAGVPELDVSLIDVYLDSVCIASKGGRSPSYTEAQGSAVMAQEEITIRIELGRGQCSETIWTTDLSHEYVKIN AEYRT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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