Pseudomonas putida PD1, EX27_RS15275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain PD1 EX27DRAFT_scaffold00005.5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTGTTGCTGTTCGGCAGCCCGGTCAGCTGGGAAGTGCCGCAGCTCAAAGGCTTCAACTTTGTCGGTGGCTGGGTGCTGATCCCCGAGTTGCTGGCGCTG ACCCTGGCGCTGACTATCTATACGGCAGCCTTCATCGCCGAGATCGTGCGTTCCGGCATCCGTTCGGTCAGCCATGGCCAGACCGAAGCCGCGCGCTCGC TGGGCCTGCGCGAGGGCCCGACCCTGCGCAAGGTGATCATCCCCCAGGCGCTGCGGGTGATCATTCCGCCGCTGACCAGCCAATACCTCAACCTGGCGAA GAACTCTTCGCTGGCGGCCGGTATCGGCTACCCGGAGATGGTCTCGCTGTTCGCCGGCACCGTGCTCAATCAGACCGGCCAGGCCATCGAGGTGATCGCC ATCACCATGAGTGTCTATCTCGCCATCAGCATCAGCATTTCGCTGCTGATGAACTGGTACAACAAGCGCATTGCGCTGATCGAGCGGTGAGGATACGCCC
DNA Sequence for Gene
>EX27_RS15275
GTGAATGCCCATGTTTTCAAACCCGATATGCCGCCACCGGTGAAAACCGTCGGCGTGCTCGCATGGATGCGTGCCAATCTGTTCTCCAGCTGGCTCAACA CGCTGTTGACCCTGTTCGCCCTCTACCTGGTGTGGCTGATCGTACCGCCGTTGCTGCAGTGGGCGTTGATCGATGCCAACTGGGTCGGCACCACGCGCGC CGATTGCACCAAGGACGGCGCCTGCTGGGTGTTCGTGCAGCAGCGCTTTGGCCAGTTCATGTACGGCTATTACCCGGCTGAGCTGCGCTGGCGTGTGGAC CTGACCGTGTGGCTTGCCGTGCTCGGCGCCGCGCCGTTGTTCATCAAGCGTTTCCCGCGCAAAGCCTTCTATGGCCTGGGCTTCCTGGTGCTGTACCCGG TACTGGCCTATACCCTGCTGCACGGTGGGTACCTGGGCCTGGAAAGCGTACCGACCAGCCAGTGGGGCGGGTTGATGCTGACCCTGGTGATCGCCACCGT GGGCATCGTCGGCGCCTTGCCGCTGGGCATCCTGCTGGCACTGGGCCGGCGTTCGAGGATGCCGGCCGTGAAAGTGGTGTGCGTGACCTTCATCGAGTTC TGGCGAGGCGTACCGCTGATCACCGTGCTGTTCATGTCGTCGGTGATGCTGCCGTTGTTCCTGCCAGAAGGCATGAGCTTCGACAAGCTGCTGCGGGCGA TGATTGGTGTGATCCTGTTCCAGTCGGCGTACATCGCCGAGGTGGTGCGCGGCGGCCTGCAGGCCATCCCCAAGGGCCAGTACGAAGCCGCCGCGGCCAT GGGCCTTGGCTACTGGCGCTCGATGGGGCTGGTGATCTTGCCGCAGGCGCTGAAGCTTGTGATCCCCGGCATCGTCAACACCTTCATTGCCCTGTTCAAG GACACCAGCCTGGTGATCATCATCGGCCTGTTCGACCTGCTCAACAGCGTAAAGCAAGCAGCCGCAGACCCTGCCTGGTTGGGCATGGCCACCGAGGGCT ACGTGTTCGCCGCCCTGGTGTTCTGGATTTTCTGTTTCGGTATGTCCCGCTACTCCATGCATCTGGAGCGCAAGCTGGACACTGGCCACAAGCGTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGTTTCGAAATGAGTGAAGCGATCAAGCAGCCTGCTGGCCCCGAAGGCATCATCCAGATGCAGGGTGTGAACAAGTGGTACGGCCAGTTCCATGTGCTC AAGGACATCAACCTGAACGTGCGCCAGGGCGAGCGTATCGTGCTGTGCGGGCCGTCCGGCTCGGGCAAGTCCACCACCATCCGCTGCCTTAACCGCCTGG AAGAGCACCAGCAAGGGCGCATCGTGGTCGATGGCGTGGAGCTGACCAACGACCTCAAGCAGATCGAGGCCATCCGCCGCGAGGTGGGCATGGTGTTCCA GCACTTCAACCTGTTCCCGCACCTGAGCATCCTGGAGAACTGCACCCTGGCGCCGATGTGGGTGCGCAAGATGCCACGGCGCAAGGCCGAGGAAATTGCC ATGCACTACCTGGAGCGTGTGCGGATTCCGGAGCAGGCACAAAAGTACCCTGGTCAGTTGTCTGGCGGCCAGCAGCAGCGTGTGGCCATTGCCCGCGCGT
Amino Acid Sequence
>amino acid ABC transporter permease
MNAHVFKPDMPPPVKTVGVLAWMRANLFSSWLNTLLTLFALYLVWLIVPPLLQWALIDANWVGTTRADCTKDGACWVFVQQRFGQFMYGYYPAELRWRVD LTVWLAVLGAAPLFIKRFPRKAFYGLGFLVLYPVLAYTLLHGGYLGLESVPTSQWGGLMLTLVIATVGIVGALPLGILLALGRRSRMPAVKVVCVTFIEF WRGVPLITVLFMSSVMLPLFLPEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKLVIPGIVNTFIALFK DTSLVIIIGLFDLLNSVKQAAADPAWLGMATEGYVFAALVFWIFCFGMSRYSMHLERKLDTGHKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site