Pseudomonas putida PD1, EX27_RS01820

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain PD1 EX27DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCTACGTGGGCGAAAACGCCGAGTTCGAACGCCAGTTGCTCAGTGGCGAGCTGGAAGTGGAACTGACCCCACAGGGCACCCTCGCCGAAAAAATGCGCG CAGGTGGTGCCGGCATTCCGGCGTTCTACACCGCCACCGGCTATGGCACCCCGGTTGCCGACGGCAAGGAAGTCCGCGAGTTCAAGGGCCGCAAGTACAT CCTGGAAGAGTCCATCACCGGTGACTTCGCCATCGTCAAGGGCTGGAAGGCCGACCACTACGGCAACGTGGTGTACCGCAACACTGCGCAAAACTTCAAC CCGCTGGCGGCCACCGCCGGCAAGATCACCGTGGTCGAAGTGGAAGAAATCGTCGAACCCGGCGTGCTGCTGCCAAGCGAAATCCACACTCCGGGCATCT ACGTGGACCGTGTCATCGTCGGCACCTTCGAAAAACGTATCGAAAAGCGCACCGTCAAGGCCTGAGCGCCATCCACCCGAACAATAAAGAGATCCTGACC
DNA Sequence for Gene
>EX27_RS01820
ATGGCACTGACCCGCGAACAGATGGCGCAACGCGTTGCCCGTGAACTGAAGGACGGTTACTACGTCAATCTGGGCATCGGCATCCCCACCTTGGTGGCCA ACTATGTACCCGCCGACATGGATGTGATGCTGCAATCGGAAAACGGCCTGCTCGGCATGGGCGAATTCCCCACCGAAAGCACCCTCGATGCCGACATGAT CAACGCCGGCAAGCAAACTGTCACCGCCCGCCGCGGCGCCTCGATTTTCGATTCGGCACAATCGTTCGCCATGATCCGTGGCGGCCACGTCGACCTGACC GTACTGGGGGCTTTCGAGGTGGACGTGCAGGGCAACATCGCCTCGTGGATGATTCCGGGCAAGCTGGTCAAGGGCATGGGCGGGGCCATGGACCTGGTGG CCGGCGCCGACAACATCATCGTCACCATGACCCACGCCTCCAAGGACGGCGAGTCCAAGTTGCTGCCACAGTGCAGCCTGCCGCTGACCGGTGCGGGCTG CATCCGCAAGGTGCTTACCGACCTGGCCTACCTGGAAATCGAAGACGGCGCCTTCATCCTGCGCGAGACCGCACCTGGGGTAAGCGTCGAGGAAATCATC GAGAAAACCGCCGGCAAGCTGATCGTGCCGGATGATGTGAAGGAAATGACCTTCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCATGACGTGATCTCACCCTGTAGGCGCGGGCTTACCCGCGAATGCGTCGGTACATTGACCGCCGCATTCGCGGGTAAGCCCGTTCCCACAGGTTTTTT GCGTTGCCTGGCAATACCGCTTCATCTCATAAAACCAATAAAAGGAATTCAACCGTGGCCGCTGAAATCCAAGACAGCCGCTCCGCGCGCTTTGCCTTGC GCTGCTCCAACTGGGCTGAACGCTGGTTCCCCGACTCCTGGGTGTTCGCCGCACTGGCGGTGCTGCTGGTGTGTATCGGCGCACTGGCCATGGGCGCCAA ACCGACCGACACCGCCAAGGCGTTTGGCGACGGCTTCTGGAGCCTGATACCGTTCACCATGCAGATGGCCTTCGTGGTCATCGGCGGTTATGTGGTGGCC AGCTCGCCGCCCGCCGCGAGGCTGATCGATCGCCTGGCGCGCATCCCCGGCAATGGGCGCTCGGCAGTGTGCTGGGTAGCACTGATCTCGATGCTGGCCT
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MALTREQMAQRVARELKDGYYVNLGIGIPTLVANYVPADMDVMLQSENGLLGMGEFPTESTLDADMINAGKQTVTARRGASIFDSAQSFAMIRGGHVDLT VLGAFEVDVQGNIASWMIPGKLVKGMGGAMDLVAGADNIIVTMTHASKDGESKLLPQCSLPLTGAGCIRKVLTDLAYLEIEDGAFILRETAPGVSVEEII EKTAGKLIVPDDVKEMTF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site