Pseudomonas putida PD1, EX27_RS13560
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain PD1 EX27DRAFT_scaffold00003.3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGAGTCGGTATCGGCCGGTGTGATCGATGCCGAAGTGCAGGACAAGGCGGTGTTGATGCGGGTGCTGACCGTCGATGACTCGTCGGTGGCGCGCAAGCA GGTCAGCCGTTGCCTGCAGACCGTAGGGGTCGAGGTGGTGGCGCTCAATGATGGCCGTCAGGCGCTGAACTACCTGCGTCAGCTGGTGGATGAGGGCAAA AAACCGGAAGAAGAGTTCCTGATGATGATCTCGGACATTGAAATGCCGGAAATGGACGGTTATACGCTAACCGCAGAGATTCGCAGCGATCCGCGCATGC AAAAATTGCACATCTGCCTGCATACTTCGCTTTCCGGGGTGTTCAACCAGGCAATGGTCAAGAAGGTCGGCGCCGATGACTTCCTGGCCAAGTTCAAGCC GGACGACTTGGCCCAACGGGTGGTCGACCGGATCAAGGCAGCGCATTGAAGCAGCCGGGGGCATGCCCCCGGCACCAGTGATTGAAAAGAGGCGGCAGTA
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| DNA Sequence for Gene |
>EX27_RS13560
GTGTCTACGGGTAATTTGGATTTCGAACAGTTCCGGGTCTTCCTGGAGAAAGCCTGTGGCATCCTGCTGGGCGAGAATAAGCAGTATCTGGTTTCCAGCC GTCTCAACAAGCTGATGGAACAACAGGGCATCAAGAGCCTGGGTGAGCTGGTGCAGCGCATTCAGGCCCAGCCGCGCGGCGGTTTGCGCGAGCAGGTGGT CGATGCCATGACCACCAACGAGACCCTGTGGTTTCGCGACACCTACCCCTTTGAGGTGTTGAAGAACAAGGTGATCCCCGAGTTCATCCGCAACAACCCC GGCCAGCGCCTGCGCATGTGGTCGGCGGCCTGTTCGTCGGGGCAGGAGCCGTATTCCATCTCGATGGCGATCGACGAGTTCGAGCGCAGCAACCTCGGCC AGTTGAAGATGGGGGCGCAGATCGTCGCCACCGACCTCTCCGGCACCATGCTGACCAACTGCAAGACCGGCGAATACGATAGCCTGGCGATTGCCCGCGG CCTGTCCCAGGAGCGCCTGCAGCGCTACTTCGACCCCAAAGGGCCGGGGCGTTGGGCGGTCAAGCCAGCGATTCGCAGCCGTGTCGAATTCCGCTCGTTC AACCTGCTCGACAGCTATGCCAGTCTGGGCAAGTTCGACATCGTGTTCTGCCGCAATGTGCTGATCTATTTCTCGGCGCAGGTGAAGAAGGACATCCTGC TGCGCATTCACAGTACCCTCAAGCCAGGTGGCTACCTGTTCCTCGGCGCCTCGGAAGCGCTGAACGGCTTGCCGGACCATTACCAGATGGTGCAGTGCAG CCCGGGGATCATCTACCAGGCCAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCACGAAGGCCGGTATCGAGAGATGCCGGTCTTTTTGTTTGCCTATCCGCTGTTCCTGCCGAGCTCCCCGTAGGCGCGGGTTTACCCGCGAAGAGGTCGG CCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACGACGGATCGGGGGTGGACATAGGTCGG TGGTTGGGCACAGGCCGCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGCACAGGAAAACACTGACGTCAATTTTTTGTTTTGCCGCTTTTGCCGCCC ATCAATTGCCGCTTTTGTCACCTCAGGCGGAAGGCCTTTGCCGCTTTTCTGGCATCAACCTGACAGTACTGCGCCGCAATCCTCCCTAAACACGGGCTTT TCAGTGGTTGGCACAGCCCTTGCTATACCTTGCTCAACGAAATTCCGGTCAACCTCTGAAGGTTTCCCCGACATGAGCATCAGTTTCGACAAGGCGCTTG
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| Amino Acid Sequence |
>chemotaxis protein methyltransferase Cher2
MSTGNLDFEQFRVFLEKACGILLGENKQYLVSSRLNKLMEQQGIKSLGELVQRIQAQPRGGLREQVVDAMTTNETLWFRDTYPFEVLKNKVIPEFIRNNP GQRLRMWSAACSSGQEPYSISMAIDEFERSNLGQLKMGAQIVATDLSGTMLTNCKTGEYDSLAIARGLSQERLQRYFDPKGPGRWAVKPAIRSRVEFRSF NLLDSYASLGKFDIVFCRNVLIYFSAQVKKDILLRIHSTLKPGGYLFLGASEALNGLPDHYQMVQCSPGIIYQAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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