Strain | Pseudomonas putida strain PD1 EX27DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CATCGCCGGCGCCACGGCGACGGTGGCGTCAGTGGCCAGCACCAGCGTGGTCAGCAGGTCGTCTGCCATGCCTTGGGCCATGCGTGCCATGAGGTCGGCG GTGGCAGGGGCGATCAACACCAGGTCCGCCCACTTGGCCAGTTCGATATGGCCCATGGCTGCTTCGGCGGCCGGGTCGAGCAGGTCCATGTGCACGGGGT GGCCCGACAGCGCCTGCAGGGTCAGCGGGGTGATGAATTCGGCACCACCCCGGGTCATGACGACGCGCACCTGCGCGCCGTGCTCCAGGAGACGGCGAAT CAGCTCGGCGCTTTTGTAGGCGGCAATGCCGCCACCCACGCCGAGAACGATGCGCTTGCGATACAGCCGCTGCATAGGCTTGCCTTTTTCCAGTGAGAGC GGGCGACGACGTTTGAAATGCCTGCGGCGGAACGTCGCATGTACGAGGCGAAATAGATTAACACAGGGCCGAAATGGGCCGCAGCAAAGGCAGGGGTGGA
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DNA Sequence for Gene |
>EX27_RS09155
ATGAACATCAGGGAGTGGCCGGCGGAAGAACGGCCTAGGGAGAAGTTGTTGCAGCGAGGGGCAGGGAGCCTGACAGATACGGAGCTGCTGGCCGTTTTTC TCGGCTCAGGCGTACGTGGGCGTAATGTCGTGGAGCTTTCGCGAGGCTTGTTGGTGAAGTTCGGCAGCTTGCGCCGGTTGCTGGAGGCCGACCGCGAGGC CTTCGTCGGTGAGCTTGGGTTGGGCCCGGTGAGGTACAGCCAGCTGCAGGCACTGCTTGAGATCGGCCGCAGGCACCTTGCAACGTCGATTGAGCGCGAG TCTGCCATGGACAGCCCGGCAGCGGTGCGACGCTACCTGAAAGCCATGCTCAGGCATGAGGCCAGCGAGGTGTTCGGGTGTCTGTTTCTCGATACCAAGC ACCGGCCACTGGCATTTGAGATCCTGTTCAGGGGCACGATAGATCGGGCGAGTGTCTATCCGCGAGAGGTGGTGCGACGGGCGTTGGTGCACAACGCTGC GGCATTGATCCTGTGCCACAACCATCCTTCAGGGATCAGTGAACCGAGTCAGGACGATGTGCATTTGACCCTGTCGTTGAAGCGGGGGCTGGCGTTGATT GATGTGCGGGTGCTGGATCACATCATCATTGGTGATGGGGAGCCGTTGTCGATGGTCGAGCATGGGTGGATTGTGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGACTACTGAGAGCCTTATAGGGTCAGTACGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGTCAACTGCCAGGCTGGCGCTGTCCTGTAG GAGCGGGTTCACCCGCGAAGAGGCCGGTACAGGCTTATTTGGTCACTGTCACCTTGCTGAAATCCAGCCGTCCGAACGGGCTCACCTGGTACCCCTCGAC GCCTTGGCGCAGCAAGGTCGCCGCCGTCGGGTGCGCCAGTGGCACCCACAGCGCCTGCTGCTGGATCAGTGTCTGCGCCTGCTGGTACAGCCGGCTGCGC ACGCTCTGGTCGTTGGTGGTGCGCCCGGCGCTGATCAGCTGGTCGAGGCGGCTGTCGCAGAAGCGTGCGAAGTTGGTCCCTGACTCTACCGCCGCACAGG AAAACTGCGGGCTGAGGAAGTTGTCCGGGTCGCCGTTGTCGCCCGCCCAGCCCATGAACAGCAAGTCATGCTCGCCGGCCTTGGCGCGGCGTATCAGTTC
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Amino Acid Sequence |
>hypothetical protein
MNIREWPAEERPREKLLQRGAGSLTDTELLAVFLGSGVRGRNVVELSRGLLVKFGSLRRLLEADREAFVGELGLGPVRYSQLQALLEIGRRHLATSIERE SAMDSPAAVRRYLKAMLRHEASEVFGCLFLDTKHRPLAFEILFRGTIDRASVYPREVVRRALVHNAAALILCHNHPSGISEPSQDDVHLTLSLKRGLALI DVRVLDHIIIGDGEPLSMVEHGWIVA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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