Pseudomonas putida PD1, EX27_RS08715

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain PD1 EX27DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCATCCACCCGCTGGCCGGGCAGGGTGTGAACCTCGGCTTCCTCGACGCGGCGGTGCTGGCCGAGGTGCTGGTCAATGCTTGCGAGCGCGGCGAGAGACT GGCCGATGTGAAGGTGCTGAGCCGTTACGAGCGCCGGCGCATGCCACACAACCTGGCGTTGATGGCGGCGATGGAGGGCTTCGAGAGGTTGTTCCAGGCC GATCCGCTGCCGTTGCGCTGGTTGCGCAACAGCGGGTTGAAACTGGTGGAGCAGATGCCGGAGGCCAAGGCGCTGTTTGTGCGCCAGGCGTTGGGTTTGA GTGGTGACCTGCCGGATCTGGCCAAGGCTTGAGAGTGGCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAGCGTGGCGCAATCACCT GTGGCAGCCCTTTGCAACATCCGGTAACGCCTAGGTAGGTGAGCCAGAAAATGGGATTCACTACCATTCGCACCTCTCATACGATCGAGGAGTGCATTTC
DNA Sequence for Gene
>EX27_RS08715
ATGTTGCCACGCAAGCCCCTACTGGCCGCCTTGGCCCTGACCCTGTTCGGCGGCACTGCCCAGGCAGCGGACGAAGTGGTGGTGTACTCCTCGCGCATCG ACGAGCTGATCAAGCCGGTGTTCGATGCCTATACCGCCAAGACCGGGGTCAAGATCAAGTTCATCACCGACAAGGAAGCCCCGCTGATGCAGCGCATCAA GGCCGAGGGCGACAACGGCGTGGCCGACCTGCTGCTGACCGTCGATGCAGGCAACCTGTGGCAGGCCGAGCAGATGGGCATCCTGCAGCCGATCAAGTCC GACGTCATCGACCAGAACATCCCGTCGCAGTACCGCGCCTCGTCCCATGACTGGACCGGCCTGAGCCTGCGTGCCCGCACCATCATCTACTCCACCGAGC GGGTCAAACCCGAGGAGTTGAGCACCTACGAAGCCCTGGCTGACAAACAGTGGGAAGGCCGTCTGTGCCTGCGTACGGCCAAGAAGGTGTACAACCAGTC GCTGACCGCCACCCTGATCGAAACCCACGGTGAGGCCAAGACCGAGCAAATCGTCAAAGGGTGGGTCAACAACCTGTCCACCGATGTGTTCTCCGACGAC AACGCGGTGATCCAGGCCATCGAGGCCGGGCAGTGTGATGTGGGCGTGGTCAACACCTACTACTACGGCCGTCTGCACAAGCAGAACCCGAACCTGCCGG TGAAGATCTTCTGGCCCAACCAGGGTGACCGTGGTGTGCACGTGAACCTGTCGGGCATTGGCCTGACCAAGCATGCGCCACACCCGGAGGCCGCGAAGAA ACTGGTGGAATGGATGACCGGCGAAGAAGCGCAAAAGCTGTTTGCTGATATCAACCAGGAGTTCCCGGCCAACCCGAAGGTGAAGCCATCGGAGGAAGTG GCGGCGTGGGGCAGCTTCAAGGCCGACAGCATTCCGGTGGAAATTGCCGGCAAGCGCCAGGCTGAAGCCATTCGCCTGATGGATCGGGCTGGCTACAACT AA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGCCAGGCCTTATCCTCTTTGGGCCCGTTAGGGCCCTTTCGCGGGTAAACCCGCTCCTACGGGATCTGCACTGCCTTGCGCGGTCCCCGTAGGAGCGGG TTTACCCGCGAACGACCGCGCAGCGGTAGCAATCGCACTCGAGATTTCAGCCTTGCCCCACACCCCCCAACGCCGCTGGTACCTCCCGGTCTCCCTGATC GCCGCCTTGGTGCTGCTGCCCCTGAGCGTGCTGCTGTTGTCCTGGCAATCCATCGACCTGCAGATCTGGTCCCACCTGCTCGACACCCAGATGGGGCGCC TGCTCGGCAATACCCTGACCCTGGTGGTGGGTGTGGGTGTGGGTGTCACCGTGCTGGGCGTCAGCCTGGCCTGGCTCACCAGCCTCTGCGACTTCCCCGG TCGACGCTGGCTGGACTGGGCGCTGATGCTACCGTTCGCCATCCCGGCCTACGTGCTGGCATTCGTCTTCGTTGGCCTGCTGGACTTTGCCGGCCCGGTG
Amino Acid Sequence
>iron ABC transporter substrate-binding protein
MLPRKPLLAALALTLFGGTAQAADEVVVYSSRIDELIKPVFDAYTAKTGVKIKFITDKEAPLMQRIKAEGDNGVADLLLTVDAGNLWQAEQMGILQPIKS DVIDQNIPSQYRASSHDWTGLSLRARTIIYSTERVKPEELSTYEALADKQWEGRLCLRTAKKVYNQSLTATLIETHGEAKTEQIVKGWVNNLSTDVFSDD NAVIQAIEAGQCDVGVVNTYYYGRLHKQNPNLPVKIFWPNQGDRGVHVNLSGIGLTKHAPHPEAAKKLVEWMTGEEAQKLFADINQEFPANPKVKPSEEV AAWGSFKADSIPVEIAGKRQAEAIRLMDRAGYN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site