Pseudomonas putida YKD221, TR32_RS00495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCGAGATGCTTTTGCTCGAAGGGTTCCAGGCAGGGCTTTCATGGATTACCGTTTTGCGCAAACGCGAGCGTTATCGCCAGGTGATGTACGGCTTCGACC CCGTGAGGCTGGCGGCCATGGGCGACGAACGCATCGAAGAATTGATGCAGGATGCAGGCATCATCCGCAATCGCCTCAAGCTCAAGGCTGCGCGGCGCAA CGCCCAGGCCTGGCTGGCTGTGGATAACCCTGCCGAATGGCTGTGGTCGTTCGTCGGCGGCTCGCCGAAGATCAACCACTTCAAGGCGCGCGGCGACGTG CCAGCTGTTACCGATGAAGCCAAGGCAATGAGCAAGGCCTTGCAGAAAGCTGGCTTCACGTTCGTCGGTCCGACCATCTGCTACGCCTTCATGCAGGCCA CCGGCATGGTCATGGACCACACCACCGACTGCGATCGCTACGCCGCCTTGTTGCGCTGAGGGGTTACAATGCGCGCCTTGCTGAAATAAGGAATTCGCCT
|
|
| DNA Sequence for Gene |
>TR32_RS00495
GTGGAAAAGTTCAAGGGCGCCCTGATGGTCGGGGTGCTGCGCCTGTTTGCCAAGCTGCCCTGGGGCGCTGTGCAGCGTGTCGGCGCCGGTATTGGCTGGC TGATGTGGAAAATCCCCAACAGTTCGCGCAACGTGGTACGGATCAACCTGGCCAAGTGCTTCCCGGAGATGGACCCGGTTGCCCGTGAGCAACTGGTGGG CCAGGCGCTGCGGGATATCGGTAAATCCTTTGTCGAAAGTGCCTGTGCCTGGATCTGGCCGCCACAACGCTCGCTGGAGCTGGTCAAGGAAGTGCATGGC CTGGAAGTGCTGGAGCAGGCTTTGGCCTCAGGTAAAGGGGTGGTCGGCATCACCAGCCACCTGGGCAACTGGGAAGTGTTGAACCACTTCTACTGCAACC AGTGCAAACCGATCATCTTCTACCGCCCGCCGAAGCTGAAGGCGGTGGATGATCTGCTGCGCGAGCAGCGCGTGCAGATGGGCAATCGCGTGGCACCGTC GACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTC GTGCCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGC CGGATGGCTCGGGCTTCAAGGTGTTCCTGGAGGCGGCGCCAGAGGAGATGTACAGCACCGACGTGAATGTGTCGGCGGCGGCGATGAGCAAGGTGGTCGA GCGCTATGTGCGCGAGTACCCCAGCCAGTACATGTGGAGCATGAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGCATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCA AGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCC TTGCGCGCCGCCGCCAGCTCGCCCTGCAGCTGATAGGCCTTGCCCAGCAGCTTCCATGCTGCCGAGTATTTCGGATCCTGCTCTACACAGCGCGCCAGGT GCACCGCTGCTTCAGCGCCGTTGCCTTCATCCAGCCAGGCCTTGCCCAGGCCAAACCTCAGCAGCGGGTTATCCACACCTTTGGCCAGCATCTTCTCCAG CGATTCGCGCATGCCCTCTTCTCCTAGAAGAAACTCAAGCCGACGTGGAACAGCTTCTCCACATCACGAATGTGCTTTTTATCCACAACGAACAGGATCA
|
|
| Amino Acid Sequence |
>lauroyl acyltransferase
MEKFKGALMVGVLRLFAKLPWGAVQRVGAGIGWLMWKIPNSSRNVVRINLAKCFPEMDPVAREQLVGQALRDIGKSFVESACAWIWPPQRSLELVKEVHG LEVLEQALASGKGVVGITSHLGNWEVLNHFYCNQCKPIIFYRPPKLKAVDDLLREQRVQMGNRVAPSTKEGILSVIKEVRRGGQVGIPADPEPAESAGVF VPFLGTQALTSKFVPNMLAGGKAVGVFLHALRLPDGSGFKVFLEAAPEEMYSTDVNVSAAAMSKVVERYVREYPSQYMWSMKRFKKRPAGEPRWY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|