Pseudomonas putida YKD221, TR32_RS00480

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCGGGCCGATGCTGCTCAAGGTCGTCACCCCGATCAGCGCCGAGGACACCGGCGGCACCTTGCACGATCGCCTGGCCGAAATGGGCCCGCCCGCAGTCG TTCAGGCCATCGCCGGCCTGGCTGACGGTTCGCTGCAAGGCGAAATACAGGACGATGCCCTGGCCACCTACGCGCACAAACTGAACAAGGACGAAGCGCG TATCGACTGGACCCGCCCGGCCGTCGAGCTGGAACGCCTGATCCGCGCCTTCAACCCATGGCCGGTGTGCCACAGCATGCTGGACGGTGAAAGCGTCAAG GTGCTGGCCGCCAACCTGTCCACAGGCCAAGGCGCCCCGGGCGAGATACTTTCCGCCAGCAAGGACGGCCTCGTAGTTGCGTGCGGTGACCAAGCCCTGA GCCTGACCCGCCTGCAACTGCCTGGCGGCAAGGCATTGAGCTTCAGTGACCTGTTCAACAGCCGCCGCGAGAAGTTCGCCGCCGGCAAGGTGCTGGGCCA
DNA Sequence for Gene
>TR32_RS00480
ATGAACCCACGCCTCGCCGCCGCCCGTGCGCTTGCTGCTGTGCTCAGCGGCAAGGCTTCGCTGAACAGCTCGCTGCCGGCGCAACTGGACAAGGTAGATG AACGCGACCGCGGCCTGACCCAAGACCTGGCGTTCGGCACCGCACGCTGGCAGCCACGCCTCGACCTGCTGGCCGCACAGCTGCTGCAAAAACCCTTCAA AGCAGCCGATGCCGATGTTCAGGCGCTGCTGCTGGTCGGCCTGTACCAGCTGTTCTACACGCGCATTCCGGCCCATGCCGCCATCGGCGAGACCGTGGGC TGTGCCGACAAACTGAAGAAGCCGTGGGCCAAGGGCCTGCTCAATGCCGTACTGCGCCGTGCACAGCGCGAAGGCGAGGAGCTGCTCGCCGGCATGGAGC GCGACCCGGTGGTGCGTACCGCGCACCCGCGCTGGCTGCAAAAAGCGCTGAAAGCTTTCTGGCCAGAGCAGTGGGAAGCCATCTGCGCCGCCAACAATGC CCACCCACCGATGATTCTGCGGGTCAATCGCCGTCACCATAGCCGCGATGCCTACCTGGCACTGCTGGCCGAAGCCGGCATCGGCGCCAGCGCATGCCAG TACAGCCGGGATGGCATCGTGCTGGCCGAAGCCTGCGACGTGCGCGGCCTGCCAGGCTTCGCCGAAGGCTGGGTGAGCGTGCAGGACGAAGCTGCGCAGC TATCTGCCGACCTGCTGGAACTGGCCCCCGGTCAACGCGTGCTCGATGCTTGCTGCGCACCGGGCGGCAAAACCTGCCACCTGCTGGAGGCCGAGGCTGG CCTGGCGCACATGGTGGCCATCGATCTCGAAGCCAAGCGGCTGACCCGCGTGCGAGAAAACCTCGACCGCCTGCAGCTGGACGCCGAGCTGATCGCCTGC GATGCCCGCGACACTGCCAGCTGGTGGGACGGCAAGCCATTCCAGCGCATTCTGCTCGACGCGCCGTGCTCGGCCACCGGCGTGATTCGCCGCCACCCGG ACATCAAGCTGACCCGCCAAGCCGACGACATCCCGGCTTTGGCCACGCTGCAAGGCGAGCTGCTCGATGCCCTGTGGCCGACCTTGGAAGTGGGCGGCAT GCTGCTATACGCCACCTGCTCCAGCTTGCCGACCGAAAACACTGAAGTGATCAAAGCCTTCCTCGCCCGCACCCCGGGCGCCCGTGAGCTGGACCTGGCG ACCGAAGCCGGCCTGCGCCAGCCCCACGGCCGTCAGCTGCTGGCCCAGGAAGGCGGTCACGACGGTTTCTACTATGCCAAGCTGATCAAGATCGCCGCCT CGCGCGGATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAACAAAGGATAGGGAGTAGCGCATGAAGATCATCATCCTCGGCGCAGGGCAGGTAGGCGGTACGCTGGCTGAACACCTGGCCAGCGAAGCCAACGACAT TACCGTGGTCGACACCGACGGCGACCGCCTGCGCGACCTTGGCGACCGCCTGGACATCCGCACCGTCCAGGGCCGCGGCTCACTGCCGACGGTGCTGCGT CAGGCCGGTGCCGACGACGCCGACATGCTGGTGGCAGTAACCAACAGTGACGAGACCAACATGGTTGCCTGCCAGGTGGCCTATTCGCTGTTCCATACCC CGACCAAGATTGCACGGGTGCGCGAATCGTCCTACCTGACCCGCGAAGAGCTGTTCGACAACGACCATATCCCGGTCGACGTTCTGATCAGCCCCGAGCA GGTGGTGACCAATTACATCAAGCGCCTGATCGAACACCCAGGCTCGCTGCAGGTGATCGACTTCGCCGAGGGCAAGGCCCAGCTCGTGGCAGTGAAGGCC
Amino Acid Sequence
>16S rRNA methyltransferase
MNPRLAAARALAAVLSGKASLNSSLPAQLDKVDERDRGLTQDLAFGTARWQPRLDLLAAQLLQKPFKAADADVQALLLVGLYQLFYTRIPAHAAIGETVG CADKLKKPWAKGLLNAVLRRAQREGEELLAGMERDPVVRTAHPRWLQKALKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLALLAEAGIGASACQ YSRDGIVLAEACDVRGLPGFAEGWVSVQDEAAQLSADLLELAPGQRVLDACCAPGGKTCHLLEAEAGLAHMVAIDLEAKRLTRVRENLDRLQLDAELIAC DARDTASWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQADDIPALATLQGELLDALWPTLEVGGMLLYATCSSLPTENTEVIKAFLARTPGARELDLA TEAGLRQPHGRQLLAQEGGHDGFYYAKLIKIAASRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site