Pseudomonas putida YKD221, TR32_RS00260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCGGTTGGGTCAGCGCCAACTACGCAGCCGTGGCCTGCATCGACCTGCCGACCTGCCATGGCCAGTGGTGGCCAGCGGCGGATTTCAGCAACGGCTTCC ACCTGACCCAGCATGTCGGCCCCAATTACCTTGGCGGGCAGTTGGACAGTGATGCGCGCACGGCCATCCACATCAGCCACAGGTTGGGCGCGCTGCTGGT GACCTGTGTGCTGTTGATGCTCAGCTGGAAGCTGCACCGCTGTGGTCTCCCCGGCCTGGCGCGGCTGGTGCTGCTGGCGCTGGCCTTGCAAGTGGGCCTG GGCATCAGCAACGTGGTGTTCCACCTGCCGCTGGCGGTGGCTGTTGCGCACAATGCCGGCGGGGCGATGCTGCTGCTGAGCATGGTGCTGGTGAACTACC GCATTCGAGTGGTCGACAAGGTTCGTATGGGTGTCGGCCATGGTTGGCGTCTGCGGCCGGTGGTCGGGGTGGGCATTTCCCATCACATGAGGAACGACTC
DNA Sequence for Gene
>TR32_RS00260
GTGGCGACGCTTCTAAGCGTACGACGGGCCCGCTGGCGCGATTACCTTGAGCTGACCAAGCCCAAGGTGGTGGTGCTGATGCTGATCACCTCGCTGGCGG GCATGTTCCTGGCCACCCGGGCGGGCGTCAGCTGGAGCGTGCTGTTGTTCGGCAACCTGGGCATCGGCCTGTGCGCGGGTGGCGCAGCGGTGGTCAATCA TGTGGTGGATCGGCGCATCGATGCGCTGATGGCACGCACCCACAAACGGCCTTTGGCCCAAGGCCGAGTCGAGCCCCTGCCGGCGCTGTTGTTCGCCTTG GCCCTGGCGCTGCTGGGCATGGTCCTGCTGCTGGTATTCACCAACGCCCTCACCGCCTGGCTGACCCTGGCCTCATTACTCGGTTATGCGGTGCTCTACA CCGGCTTTCTCAAGCGCGCCACGCCACAGAACATCGTCATCGGTGGCCTGGCCGGTGCCGCTCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGT CAGCGCCGAACCCTTGCTGCTTGTGCTGATCATTTTCGCCTGGACCCCGCCGCATTTCTGGGCGCTGGCCATCCACCGCAAGGAGGAATACGCCAAGGCC GATATCCCGATGTTGCCGGTGACCCACGGCGAGCGCTACACCAAACTGCATATCCTGCTGTACACCCTGATCCTGCTGGCGGTGAGCCTGCTCCCGTATG CCATCCACATGAGTGGCCCGCTGTACCTGGCCTGTGCCCTGGGCTTGGGCCTGCGCTTCCTGCATTGGGCCTGGGTGTTGTACCGTAGCAGCCGGCCGCA CGCGGCGATCGGCACCTTCAAGTACTCTATCGGCTACCTGTTCGCGCTGTTCATCGCGTTGCTCCTTGACCACTACCTGTTGCTGAGCCTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGAACCCAGAAAACCGTCTTCATCCTCGTTGCCCTGGTCGCGTTGATCCTGGGCCTGACCGTCAACAAGGTGCTTAATGGTCGTGACCAGCCCAACCC TGCCGAGCTGATTGATGCGGGCATCATCCTGCTGCCGCAGAGCCGCGCCGTGGCTGATGTCACCATGACCAATCAGGACGGCCAGCCGGTGCAGATGGAT GACCTCAAGGGCAAATGGTCGCTGCTGTTCTTTGGCTACACCTACTGCCCGGACATCTGCCCGACCACCCTGGCCCAGTTGCGCCAGGTGAAGAGCGAGC TGCCCAAGGATACCGTCGACCGGCTGCAGGTGGTGTTGGTGAGTGTGGACCCTAACCGCGATACGCCGAACCAGCTGAAGCAGTATCTGGGCTATTTCGA CAAGGACTTTGTCGGCGTGGCGGGGTCGATCGAGGATACCCAGAAGCTGGCCAATGCCTTGAGCATTCCGTTCATTCCGGCGGATACCAGCAAGCCGGGG
Amino Acid Sequence
>protoheme IX farnesyltransferase 1
MATLLSVRRARWRDYLELTKPKVVVLMLITSLAGMFLATRAGVSWSVLLFGNLGIGLCAGGAAVVNHVVDRRIDALMARTHKRPLAQGRVEPLPALLFAL ALALLGMVLLLVFTNALTAWLTLASLLGYAVLYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVSGHVSAEPLLLVLIIFAWTPPHFWALAIHRKEEYAKA DIPMLPVTHGERYTKLHILLYTLILLAVSLLPYAIHMSGPLYLACALGLGLRFLHWAWVLYRSSRPHAAIGTFKYSIGYLFALFIALLLDHYLLLSL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site