Pseudomonas putida YKD221, TR32_RS03715

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGCAGCGCTGTTCACCTTGCCACTGTCGTTCGTCACCGGCCTAACGGGGTGCATCATGCTGCTTTGCCTGGCGCTGTTCAGCATCAATATGGCCAGTG CCACCGCTTGGATGATCGTCAACACCATTGTCGACAGCCAGCGCGTGGCCTCGTTTGGCTCGATCCAGAACTTCGGCGGTTACATCGCAGGCTCGGTGGC ACCGATCGTGACGGGCTTCAGCATCCAGTACTCGGGCTCGTTCACCACAGCGTTCATGATCAGCGCGGTGGTGGCGCTGTGCTCGGCGGTGGCGTATTTC CTGCTGCTTCAGGCGCCCATTGGCAGTGCCAGGGTCGAGGCGGGCGGGATGGCTGGCGCAACTGAACAGGCGTGAACGCTACGGGGGCTGCAGTGCAGCC CCTGAACCCTTGGTTGATTGTGACGCGACCCGCGGCGCTTGTCATGGAGGGGTATCTGTATGTATAAACAGTGCCTGTTGCCGCTACCTGACTTCCGCCC
DNA Sequence for Gene
>TR32_RS03715
GTGATCGCCCATTCCGTCGACGACCCGTTCTACTACCTGCATAACTTCCGCCAGGTCGTGCTGTGGGTCGAACAGCGCTACCAGGACCTGCTCGATGACC AGGAACTGGCCTTCATCCGTGCCTTCAGTCAACTGCAAGCGCCAGCCCAGGCCTTGATGGTGCGCATGGTGATGCGCAAAGGCGAGTTGTTTCGCAGCGA TCGGCTCGACTACGCCGAAATCGGCGATACTGCGCTGGCGCTGCAGCCGTTGCTGGCCCTCGGCTGGGTACGGGAGCCCGAGCAACTGGACCTTGAACAG CTGTTCGCGTTGCTGCGCAAGGAAGAACTGGCCCGCTGCTTCGCCCGGCAACTGAACCGCCCGCGCGCGGCCAAGCATGAGTTGTTGGCACAGCTGCAAC CCCTGGCGCTGGCAGCCCGGTCACTGGTCGAGTGGTTTCCTGACAGCGAGGTGCGCATCCTCCAGTGGTGCCTGCAACCTCTGTGCGACCGCATGCGCCT GCTGTTCTTCGGCAACCTGTACCAGGACTGGTCAGACTTCGTCCTTGCCGACCTGGGCTTGCTGCGTTACGAGCAGGTGCCGTTCAGCTCCGATTCGCGT GCCTTGCAGCAACGTGACGATGTCGACCTGGCCATGGCGCTGCACCAGTGCGCCGAGCGCCTGGAGCAGGGCGGCGACCCGCTGCCGATCCTTGCCACCC TGCAGGGTCTGCACAGCAGCAACCCCTGGCTGGCCCGGCGCCATGCACGACTGCAATTCGCCGTGGGCCAACAATGCGAACGCCTGGGTGAATGGGACCT GGCCACGACGGTGTATGCGCAATGCAACCATCCCCAGGCGCGCATTCGCCAGGTGAGGGTGCTGGAGCGCACCGAACAGTGGCACCAGGCCCATGCACTG GCGGTGCAACTGGCTGCGGCACCTGCCAACGCGCTGGAGGTGCAGGCGCTGCAGCGCATGCTGCCACGCCTGGCGCGCAAACTCGGCGGCCCGCCACAGC GGCGCCAGCGCACCACGCCGCTGGAACTGATCGAGCTCGAACTGCCCCGCGGGGACGCTGCACTGGGCGTTGAAGAAGCCGTGCGTCAGCACCTGATGCA AGAGGGGGGGCAGGCGCATTACGTGGAAAACACGCTGTTCAACAGCCTGTTTGGCCTGTTGTGCTGGGAGGCCATCTTCGCCCCGGTGCCCGGCGCATTC TTCAACCCGTTCCAGGCCGCGCCACAGGACCTGCACGACAGCGACTTCCAGCAACGGCGCAGTGCACTGTTCGAACGCTGCCTCGGGAGGCTCGACGAGG GTAGCCATCGCCAGGCGATTCTCGACTGCTACGTGGCCAAACAGGGGCTGCAGTCGCCGTTCGTGTTCTGGTCCATGCTCAGCGAGGAACTGCTGGAGCA GGCCTTGGCTTGCCTGCCGGCCGCGGCGCTCAAGCAATGTTTCCTGCGCCTGTTGCAGGACATTCGCAACAACCGTACCGGCATGCCCGACCTGATTCAG TTCTGGCCCGAGCAGGGCCGTTATCGCATGGTCGAGGTCAAGGGGCCCGGTGACCGCCTGCAGGACAATCAGCTGCGCTGGCTGGAGTTCTGCAGGCAGC ACGGCCTGCCGGTCGCGGTGTGCCACGTGCGCTGGAGCGAAACGCCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTACAGCGTAGCGGTGCGCGCCTTGTGTGAGTTCAGCGCCAAGGTCGGCGACCTGGACCTGCGCTTCACGCCATCGCCCACCGCCCAGGAGGGTATCGA AGGGCATCAGCGGGTGGTGGCACGGCGGGCTGCTGGCTACGAGTCGGAAATCGCCCTTGAAGGCCAGTTCGAAACCCTCAGGGTGCGGGGCCGCGCCGAT GGCTATGACCCTGGCAGCAATCGCCTGGAAGAGATCAAGACGCACCGTGGCGACCTGGCGCGTCAACCGGCCAATCACCGTCAGTTGCACTGGGCACAGG CCAAGGTTTATGGCTGGTTGATGTGCCAGGCACGACAACTGCCCGCCATCGAGGTGGCGCTGGTGTACCTCGACGTGGACAGCGACAGCCAGACGCTGTT CACGGAGCACTGTTCGGCTGCCGAGCTGCAGGCCTTCTTCGAAACCCAGTGCCAGCGCTTTCTGGGCTGGGCCCGATCGCAGCAACGACGCCTGGCCGAC
Amino Acid Sequence
>nuclease
MIAHSVDDPFYYLHNFRQVVLWVEQRYQDLLDDQELAFIRAFSQLQAPAQALMVRMVMRKGELFRSDRLDYAEIGDTALALQPLLALGWVREPEQLDLEQ LFALLRKEELARCFARQLNRPRAAKHELLAQLQPLALAARSLVEWFPDSEVRILQWCLQPLCDRMRLLFFGNLYQDWSDFVLADLGLLRYEQVPFSSDSR ALQQRDDVDLAMALHQCAERLEQGGDPLPILATLQGLHSSNPWLARRHARLQFAVGQQCERLGEWDLATTVYAQCNHPQARIRQVRVLERTEQWHQAHAL AVQLAAAPANALEVQALQRMLPRLARKLGGPPQRRQRTTPLELIELELPRGDAALGVEEAVRQHLMQEGGQAHYVENTLFNSLFGLLCWEAIFAPVPGAF FNPFQAAPQDLHDSDFQQRRSALFERCLGRLDEGSHRQAILDCYVAKQGLQSPFVFWSMLSEELLEQALACLPAAALKQCFLRLLQDIRNNRTGMPDLIQ FWPEQGRYRMVEVKGPGDRLQDNQLRWLEFCRQHGLPVAVCHVRWSETP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site