Pseudomonas putida YKD221, TR32_RS04850

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGTGTACAGGGATGACACATGAGTAACCAGGCCCGCCTGCTGCCCTCGCTGCTCGACCGACTGCTGGACGACCGTCCCTACCAGTCGGCCGAGCCCGCAG CGCAGCGCACCTGCTCGCTGGCCGAGTACAAGGCCAGCATCGTCCGCGACCTCGAAGTTCTGGTGAACACCCGCCAGTCCCTGGTCGCCGAAGAGCTCGA CGGCTTCAGCCAGCTCGGTGGTTCCATCCTTGAATACGGCATGCCGGACTTCATCAGCCGCAGCGTGCTCGACCCGCACGATCGTCGCCTGATCCAGCAA CAGCTGGAACGGGCGATCAGCACCGGAGACCGGCGCTTTCGCCGGGTCCGTGTTCAGCTGTTGGCCCAGCAGAACGGCCACCGCATGTTGACCTTCCGCG TGGACGCCGTATTGCGTCTGCAGGACATCAGCCGCCAGGTGTCATTCGACGCCGTGCTGCAGGTCAACACCCAGGAATACAAAGTGCAGAACCTCAACTG
DNA Sequence for Gene
>TR32_RS04850
ATGCTCGACGAACTGCTGCCCTACTACGAAAAGGAACTGTCGCACCTGCGCTTTCTCGGCCAGGAGTTTGCCGCGCAGTACCCGAAGATCGCTTCGCGGC TGCTGATCGAGGGCGACAACTGCGAAGACCCGCACACCGAGCGCCTGATCGAGGCGTTCTCGTTCCTGTCTGCGCGGGTGCACAAGAAGCTCGATGACGA GTTTCCGGAAATCGTCGAATCCTTCCTCGAGGTGCTGTACCCCCACTACCTGCGCCCTACTCCGTCGATGTCGATTGTCGAACTGAGCCTGGGCAGGCAC GAAAAAGTCACCGAAGCCTACCGCGTGGCGCGCCATACCGAGATGCATGCCAATCCCGTGGAGGGCGTGGTGTGCAAGTTCCGCACCTGCTACCCGGTAG AGCTGTGGCCGATTGCCGTGCAGCAGGCCTCGTTCACAGAAATGGAACGTTCGGCCTTCAACGGGCACAGCGCCGACCTGGTCGCTCATCTGCGCATTCG CTTGGCTGCCACGGGCGATGCCCTGTTCGGGCAGATGGACATGAACCGCCTGCGGTTCTTCCTCGACGGCGAAGCAACCCTGATGCTGCAGCTGTACGAG CTGCTGTTCAACAACCTGGCCAAGGCCACGCTGAGCTTCGACGACCAGGGCCGCCGCCGCGAAGTGGCGCTGCCGGCCGATGCCCTGAACACCGTGGGCT ACGCCCGTGACGAAGGCCTGGTGGACTACTCCGAGCGCTCATTCCTGGGCTACCGCCTGCTGCACGAGTATTTCACCTTCCCCGACAAGTTCATGTTCTT CGACCTCAGTGGATTTGCCCGTATCCTGCAGGGCAAGGCCATCGAACATGTAGAGGTCAACTTCTATTTCTCCGACTACGACCTCAGCGAGCGCCTGGCG CGGCTGACCCAGAACATCGGGCGCAACAACTTCAAGCTCAACTGCACGCCGATCATCAACCTGTTCCGCCAGCAGGCCGAGCCGATCAAGCTGACCCACA CCCAGCACGAATACCCGGTCACCCCTGACACACGGCTGCACAACGCTGCAGAAGTGGTATCGATCGACCGGGTACGGCGGGTGCGCAAACTCGGCGGTAT CGACCAGGTCGCCACCTGCCAGCCGTTTTTCGAACCCCGGGGCGAGCAAGACCCACACAGCAGCTTCTGGGTCGCGCGCCGGCGAAACCAGGGTGACGCC ACTGCCATGAGCATCCGCGTGGTCGACCGCGATCTGGAATTGATCGACGCCAGCAGCGACACCCTCAGCATCGGCCTTACCTGCAGCAACCGCGACGTGC CGCTGCTGCTGCCGTTCGGTGGCGAACGGGGCGATTTCACCATTCCCGCCAACTCGGTGATCAAGGACATCCGCTGCCTGCGCAAGCCCACCGCCACGGT GCGCGTGCCCTTGGGCAAGGGCCTGATCTGGCGGTTGATCGCCCACTTGTCGCTGAACCACCTGTCCCTGGTCAGCCAGGGCCGCGAAGTGCTGCTGGAG CTGTTGTCGCTGTACAACTACCGCAATGTTTCCGCCATTCGCAAACAGATCAACGGCATCAAGGCGATCAGCAGCGAACCGGTGGTCGCGCGCATCGGCC ACCCGCGGCCAAATTTCGTGCGCGGGGTCGGCATCACCCTGACCCTGGACGAAAGCCAGTTCATCGGCAGCGGCGTGTTTCTGTTCGGCAAAGTGCTGGA CCACTTCTTCGGCCAGTACTGCTCGATGAACAGCTTCACCCAACTGACCCTGCGCACCCAACAACGAGAAAAGAGAGTCGTACAATGGCCAGCACGCACC GGCGATCAGCCCCTGGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGATCAGGCCCGAGCCGAGCCGCACCGATTCGAATTCTTTCAATTGGTGCGCCTGCTCCGCCTGCACTACAGCCGTACCGGGCGCATGGACCTGGCAAC CCGGCCGCACGAAGACCCGCTGCGTTTTCGTACCCAGCTGTCGCTGGCGTTCCCGGCCAGCGAGGTCAGCGACCTGCACTTCGAGCGCGAAGGCAAGGTG TCGCCGGCCGGCTTGCCGCTGTCGGAAGTGCAGGTCACCTTCATGGGCCTGGTCGGGCCGTCGGGCGTGCTGCCACGCCCGTACACCGAGCTGCTGCTCG AGCGCCACGTGCAGTATCGCGACGATGCCGCCCATGCGTTTCTCGACATCTTCTCGCACCGCATGACCACGCTGTTCTACGAGGCCTGGCAAAAATACAA ATTCCACATCGAGCACGAGCGCAATGGCACTTCGGGCTTCGACGGCTACCTGCTCAACCTGGTTGGCCTCGGGCCGCGCGCCCAGAAGCTGAAGTTCGAA
Amino Acid Sequence
>hypothetical protein
MLDELLPYYEKELSHLRFLGQEFAAQYPKIASRLLIEGDNCEDPHTERLIEAFSFLSARVHKKLDDEFPEIVESFLEVLYPHYLRPTPSMSIVELSLGRH EKVTEAYRVARHTEMHANPVEGVVCKFRTCYPVELWPIAVQQASFTEMERSAFNGHSADLVAHLRIRLAATGDALFGQMDMNRLRFFLDGEATLMLQLYE LLFNNLAKATLSFDDQGRRREVALPADALNTVGYARDEGLVDYSERSFLGYRLLHEYFTFPDKFMFFDLSGFARILQGKAIEHVEVNFYFSDYDLSERLA RLTQNIGRNNFKLNCTPIINLFRQQAEPIKLTHTQHEYPVTPDTRLHNAAEVVSIDRVRRVRKLGGIDQVATCQPFFEPRGEQDPHSSFWVARRRNQGDA TAMSIRVVDRDLELIDASSDTLSIGLTCSNRDVPLLLPFGGERGDFTIPANSVIKDIRCLRKPTATVRVPLGKGLIWRLIAHLSLNHLSLVSQGREVLLE LLSLYNYRNVSAIRKQINGIKAISSEPVVARIGHPRPNFVRGVGITLTLDESQFIGSGVFLFGKVLDHFFGQYCSMNSFTQLTLRTQQREKRVVQWPART GDQPLV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site