Pseudomonas putida YKD221, TR32_RS04995

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGACTTCGCCCGTCAGCCCAAGCTGGCGGATGCCGAACGCCGTGCGCGCATCGACCATGCGATTGCGGCTGTGGGCCTGGCCCACGCGCGTGGCCAGTAC CCGGCGCAGTTGTCTGGCGGCATGGCCCAGCGCACCGCGCTGGCCCGCTGCCTGGCACGCCAGCCCGAAGTCTTGCTGCTGGATGAACCCTTCGGTGCGT TGGATGAGGTGACCCGCGCCGACATGCAGCAGCTGCTGCTGCAACTGATCGCCACGCACAAGACCGCGGCCGTGCTGATCACTCACGATATCGACGAAGC CCTGCTGCTGTCAGACCGAGTTCTGCTACTGGGCAACCACCCAGCGCACATCCTTGGCCAGTGGCACATCGACCTGCCGCAACCGCGCACGCAGAGGGTC GAAGAGCTGGGGGCCTTGCGCATAGACATCCTCAAAACCCTTCGGCGGGCAAGCCGCACAGTCGAACCTACCCCAACCCCTTTGCCCTCGGAGGCTGTCC
DNA Sequence for Gene
>TR32_RS04995
ATGTGCATGGATGACTGCTGTTCTTCTTCTTCGCGTCGTGACTTCCTCAAGCTCGGCGCCATGCTCACTGCTGCCGGTGCATTGCCGTTGCTGTCGAGCT TGCAGGCGCGTGCCGCTGCCGAGCCGGACGCGCCGGTGCGCATCGGCTACCTGCCGATCACCGATGCCACGCCGCTGCTGGTGGCACATAACAACGGCTT GTTCGAGGCCGAAGGCATCCAGGCCGAGCGCCCGGTGCTGCTGCGCAGCTGGGCGCAGGTGATCGAGGCCTTCATTTCCGGCCAGGTCAATGTCATCCAC CTGCTTTCGCCGATGACAGTATGGGCGCGCTATGGCAGCAAGGTGCCAGCCAAGGTGGTGGCCTGGAACCACGTGGGCGGTTCGGGCCTGACTGTAGCGC CGGATATATCCGACGTGAAACAGCTCGGTGGCAAGACAGTGGCCATTCCGTTCTGGTACTCGATCCACAATGTGGTACTGCAACAGTTACTCAACGACAA CGGCCTGACGCCAGTGTCGAAGCCGGCCAATGCGCAACTGGCCGCCAACGAGGTCAACCTGCTGGTGCTGCCACCGTCCGACATGCCACCGGCTCTGGCC AGCAAGCGCATTGCCGGCTACATCGTTGCCGAACCGTTCAACGCACTGGCCGAGAACCTCAAGGTGGGCCGCGTGCAGCGCTTTACCGGCGATGTATGGC GCAACCATGCGTGCTGCGTGGTGTTCATGCACGAGCATGACCTGAATAACCGCCCGGAATGGTCGCAGAAAGTGGTCAACGTCATCGTCAAGGCCCAGCA ATGGACCCGTGACCATCGCACCGAAGCCGCCGCACTGCTGTCCCGGGCGGGCCCCAACAAGTACACCCCGCACGAGCCTGCGGTGCTGACCAAGGTCCTG GCGCCCGCCGCCGAAGACCGTGCTGGCTACATTGCCAGTGGTGCCATTCGCCATCAGCAGTGGGACGAAAAGCGCATCGACTTCCAGCCATACCCGTTCC CGAGTTACACCGAAGAGCTGGTCAAGCGCCTGAAAACCACCCTGATCGAAGGCGACAATGCCTTCCTTGCCGGGCTGGATCCGGCGTATGCCGCCCGCGA CCTGGTCGACGATCGCTTCGTGCGTAATGCCATCGCGACAGTGGGTGGCCCGTCGGTGTTCGGCATTGCCGACAACTTCGAGCGTAGCGAGGAGTTTGCG GTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCGCACCCATGTCGTACATGCCGGCCTTGGGCTGGTCGGGTTGCTGGCCTTGTTGCTGTTATGGTGGGCCGGTGTAGCACTGTTCGGCCAGGCCGACGG CCTGTCGGCGCGCTTTTCGCCGGCGGCAACCCTGGCCAGCCTGGTCGAGCTGCTGGGGCAGGGCGAGGTCTATGGGCATATCTGGGTCAGCCTCAAGCGC ATCCTGATTGGGCTGCTGCTGGCGCTGCTGATGGGGGTGCCGCTGGGCTTGCTGGTAGGCAGCTACCGGCACCTGGAGGCGGCGACCACGCCAGCATTCC AGTTTCTGCGCATGATATCGCCATTGTCGTGGATGCCTGTGGTGGTGATGCTGATGGGCGTGGGTGACCAGCCGATCTACTTCCTGCTGGCGTTTGCCGC GTTGTGGCCGATCTTGCTGAATACGGCGGCAGGGGTGCGTCAACTGGACCCGCGCTGGCTGCAACTTAGCCGCAGCTTGACTGCAACGCGCTGGGAAACC
Amino Acid Sequence
>ABC transporter substrate-binding protein
MCMDDCCSSSSRRDFLKLGAMLTAAGALPLLSSLQARAAAEPDAPVRIGYLPITDATPLLVAHNNGLFEAEGIQAERPVLLRSWAQVIEAFISGQVNVIH LLSPMTVWARYGSKVPAKVVAWNHVGGSGLTVAPDISDVKQLGGKTVAIPFWYSIHNVVLQQLLNDNGLTPVSKPANAQLAANEVNLLVLPPSDMPPALA SKRIAGYIVAEPFNALAENLKVGRVQRFTGDVWRNHACCVVFMHEHDLNNRPEWSQKVVNVIVKAQQWTRDHRTEAAALLSRAGPNKYTPHEPAVLTKVL APAAEDRAGYIASGAIRHQQWDEKRIDFQPYPFPSYTEELVKRLKTTLIEGDNAFLAGLDPAYAARDLVDDRFVRNAIATVGGPSVFGIADNFERSEEFA V
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site