Strain | Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAGGCGACCCGCTCGATCCTGGACTACCTGGCATTCGCCCGAGCATTCAACCAGGGCTTTCCCGGGTTTGTCGCCGATGTGCACGGCCTGCAGCACGAA GGGGGCCGCTACACGGTGGATTGCATCACGGAATGCGCGTGATCTCGACGCCGGAGCGTGCCAGTTCGAAACGGTTATCACCCAGGTGGTTGACCTTGTC GCCGATGGCCAGGCGGTAGGTGGTGATGGGGGCGCCCAGCGTGCTGCCGTCGAGTTGCAGGGTGGATTCCTGAAACTCGTGCACGGGGTAGATGCGGCCT TCGGCGTCACGGGCGTGGAATTGGCCGACCATTACTGCTGCCATTTGGGTGGAAACCTCTGAATTACGTAGGAAATGTATGAAGGCATAGACCGTGAAAC AGACGCGGAAGTTTTCGCCCTGCGGAAAAAAAACTTAGGCACTGGAGAACGGTCATCTATAACTACAACGTCTATTTAACCCGCAAAGGTTGGAATTGCC
|
|
DNA Sequence for Gene |
>TR32_RS06805
ATGAGCCAGGTGTATTCGGTAGCAGTCGTCGTGGGCAGCTTGCGCAAGGCGTCCTACAACCGCAAGGTCGCCCGCGCACTTTCGGAGCTGGCGCCGTCCA GCCTCGCGCTGAAGATCGTCGAGATTGGCGACCTGCCGCTGTACAACGAAGATGTCGAAGCCGAGGCACCGCCGGAAACCTGGAAGCGTTTTCGCGATGA AATCCGCCGCAGTGATGCGGTGTTGTTCGTCACCCCGGAATACAACCGCTCGGTGCCAGGCTGCCTGAAAAATGCCATCGATGTGGGTTCGCGTCCTTAC GGGCAAAGTGCCTGGAGCGGCAAGCCGACGGCGGTGGTGAGTGTGTCGCCGGGGGCGATTGGTGGCTTTGGCGCCAACCATGCGGTGCGCCAGTCGCTGG TGTTTCTCGACATGCCCTGCATGCAGATGCCCGAGGCTTACCTTGGCGGTGCGGCGAGCTTGTTCGAGGATTCGGGCAAGCTCAACGACAAGACGCGACC GTTCTTGCAGGCGTTTGTCGACAGGTTTGCTTCATGGGTGAAGTTGAACAGGGCGGTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCCCTAATCCTGCTGTGCAACGCCCCTGTGTAGGCGCGGGTTTACCCGCGAATGCGGCATTGAATTTGCCGACGCATTCGCGGGTAAACCCGCGCCTAC CCGTCAGCGGAAGCTGTAGGAAACCCCCGCGTATACGCCAAACCCTTCGCCCGGTGTCGAACGGGCATTGTCCTGGCCGGCGTCGTTGTAGGCCGGCGTC ACGGTCGCTGCATAGCGCTGGTTGGTCAGGTTGCGCAGGTCCAGCCAGGTCTGCCAGTCCTGTTTCGGTGAGTCCCAGCCAACGCGTGCGCCGAGCAAGG CATATTCATCGGCGTGGTAGCTATTGGCGTAGTCCACCTGCACCTTCGAAGCCATTTGTGTGTTGACCCCGGCATAGAAGCCGCTCGGCCAGTCATAGCG CAGCTCGGCCTGGTAGTAGTGCATGGGGATGCCGGGCAGACGGTTGTCGCCAAACGTGTCGTCATCACGGTAGTGGAAGTCGCTGAAGGTGTAGGCCTGG
|
|
Amino Acid Sequence |
>ACP phosphodiesterase
MSQVYSVAVVVGSLRKASYNRKVARALSELAPSSLALKIVEIGDLPLYNEDVEAEAPPETWKRFRDEIRRSDAVLFVTPEYNRSVPGCLKNAIDVGSRPY GQSAWSGKPTAVVSVSPGAIGGFGANHAVRQSLVFLDMPCMQMPEAYLGGAASLFEDSGKLNDKTRPFLQAFVDRFASWVKLNRAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|