Strain | Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCAAAGCGCGATGCTCGCTGCCAATGCCGCGAATCTGCAGGTTGCCACGGTTGGTGGCCTCGATCACGCCGCCAGCAAAACGCTCCGCCGCCGCCGCCA CGGCTTCAGCCTGCTCGGCCAGCAGCAGGCCACCCGGCAGCTTGATGCGGCAGATACCGCCATCACGGGCACTGACAATGCGCCACAACCCCGGGCAGGC CGAGGGGCGGGGCGATACGTGGGGGGCATGGGCCTGCGTCAAAGGGGCATCCGGCAGTCTGTGAAAATGCGCTTGAGTGTAGAAGGCGCGGTATTATGCC TGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATTAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCGCGGGCTCGCCCGCTTCC ACAGGATCACTGCAGGCTGCACAGGCTGCCCTGTATCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATCGAAATAC
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DNA Sequence for Gene |
>TR32_RS07920
ATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGCGCCCTGCTGGGCGCTGGGCGGGTCTTCG GCAGCCCACGCCAGCTGGCCTTGCTGCCACGTTGCGTGACCGCGGAACAGCTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCGGTGCTGGCCCTTCGCGG CGAGCCGGTGTGCGTGCTGGCCAGCGGTGACCCTATGTTCTACGGCGTCGGTGCCAGCCTGGCGCGCCAGGTGCCTGCTGCAGAAATGCGCGTGCTGTCG ATGCCCTCTTCCTGCGCCCTGGCCGCTGCCCGCCTGGGCTGGCCGCTGCAGGACCTGCAGGTGGTGTCGCTGGTGGCCCGCCCCCTGGCAGCGCTCAATG CCCACTTGCACAGCGGCATGCGCCTGCTGGTGCTGAGCAACGATGGCGACAGCCCGGCGGCAATTGCCGCGCAGCTGCGCGGGCAAGGCTTCGGCCCAAG CCGCCTGCAGGTGTTCGAGCACTTGGGGGGCGTGGACGAACGTGCACTGGCCGGAACCGCCCAGGACTGGCCGCACACCGGTATCGCGGCGCTCAACCTG GTCGCCGTCGAATGCCTGGCTACGCCCGATGCGCCCCGCCTGCACCGACTGGCCGGGCTGCCAGACGCCGCATACCGGCACGATGGCCAGTTGACCAAGC GCGATGTCCGCGCCATCACCCTGGCGCGCCTGGCACCGCAACCCGGCGAACTTTTGTGGGATGTCGGTGCGGGCTGCGGCTCGATCGGCATCGAATGGAT GCGTGCCCACCCGGCATGCCGCGCGCTGGCCATCGAGGCCGACGAAGGCCGCCAGGGTTTGATCGAGCATAACCGCGATGCATTGGGTGTACCCGGTCTG CAACTGGTTCGCGGCAAAGCGCCAGCGGCGCTGCAAGGCCTGGAGCAACCGGATGCAATCTTCATCGGAGGCGGCGTTACCCGCGCAGGTGTACTGGACC TGTGCTGGGCAAGCCTGCGCCCCGGCGGCCGCCTGGTGGCCAACGCCGTCACCCTGCAAAGCGAACTGGCCCTGGCGCACTTTCGCGAACAGCACGGTGG TGAGCTGACCCGTATCCATGTCGCTCATGCCCAGCCCTTGGGTGCGTTCGACACCTGGCGCCAGGCGCTGCCGATCACCCTTCTGGAAGTACTGAAACCC GCCGATGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGAAACCCGCGAACAGCCCGCGCCTCTGCGCAGCGGCCTTACCACCGGCAGCTGCGCCACCGCCACCAGCCTGGCAGCGGCCAAGCTGCTGCTCACCGGG CAGCGTGATGATGCGGTGGACATCACCCTGCCCAAAGGCAAGGTCGTGCAGATGCGCCTGGAATTCTGCCGCCTGATCGGCGAGTGCGCCGAAGCCGGTA CCCTCAAGGATGCGGGTGACGACCCGGACGTGACCCACGGTGCCCTGCTCTATAGCCAGGTGCGCCTGCTGGCGGAACCTGGCATTGGTTTTGTCGCTGG CAGCGGCGTGGGCACGGTGACACGCCCGGGGCTGGTGCTGGCGGTGGGTGAGCCGGCCATCAACCCGGTGCCTCGGCGCATGATCAGTGAACACCTGCAA CGCCTGGCCGACGCGTGCGGCTACCTTGGCGGCTTCGAGGTCACGGTCAATGTGCAAGGTGGTGAGCAACTGGCCCTGAAAACCATGAACCCGCGCCTGG
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Amino Acid Sequence |
>precorrin-6Y C5,15-methyltransferase
MTPWLTVVGIGEDGFSGLGKQARRALLGAGRVFGSPRQLALLPRCVTAEQLAWPSPFSLAPVLALRGEPVCVLASGDPMFYGVGASLARQVPAAEMRVLS MPSSCALAAARLGWPLQDLQVVSLVARPLAALNAHLHSGMRLLVLSNDGDSPAAIAAQLRGQGFGPSRLQVFEHLGGVDERALAGTAQDWPHTGIAALNL VAVECLATPDAPRLHRLAGLPDAAYRHDGQLTKRDVRAITLARLAPQPGELLWDVGAGCGSIGIEWMRAHPACRALAIEADEGRQGLIEHNRDALGVPGL QLVRGKAPAALQGLEQPDAIFIGGGVTRAGVLDLCWASLRPGGRLVANAVTLQSELALAHFREQHGGELTRIHVAHAQPLGAFDTWRQALPITLLEVLKP ADA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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