Pseudomonas putida YKD221, TR32_RS08450
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCTGGAGCGGGCCAAGCCAGAAGTCCTGGTGATGCCCCACCCGCAGCTAGACCCCCATCCGGACCATATCTGCGCTCAGGCGGCGGTGCTGGAAGCCTT GCAAGGTATGGCCTGGCAGCCACAAACCTTGCTGTGCTACGCCAACCACCTGCACGATAACGACCGCTGGCCGATGGGCGACAGTGGCGATGGCGTGGCT TTGCCGCCGCAATTGAGCGCTGCCCAGGCCTGGGCGCCCTGCAGCCTGGTGCTGGACTGCGCGACCCAGCGCGACAAGGCCATGGCCCTGGGCATGATGC ACGACCTGCAGCCGGCGGCACCGTTCAAGCGCCGCCTGCGCCGTCTGCTGCAACGCTGGCTTGCCGGGCGACAGCCATCGCCTTTTGGGGAGAACGAATT CTTCCGCAAGGCCGTGCGCCGGCACGAACTGTTCTGGCGGCGTGAGCTGTAAGCACGCCCCATGGTTGACCGCGAAGGCGCAGAGCGCCCAAGGAAAGCA
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| DNA Sequence for Gene |
>TR32_RS08450
ATGAAAGTCCTATTTCTGGTGCAGAAGGAACAGCGGGCGATTCTTGACCGCCTGTACGATGGCGTCGCGGCCAACTGCGAGTGCGACCTGCGCTGGCTGA CCAGCCAGGATCAGCGCAACCTGCGCCGTTACTTCAAGCGTGAGGTGCAGGTCGAGCGCTATGACCGGATCGTGTTCTTCCTGCGTTTCAAGCAGGAGAT CCGCCAGGTGGCCTTCATCCGCACTGTGCCGAACCTGGTGATTCTCGAGCACGACGCCTACCAGAACTACATCCCGTGCAAGTACACCGGCAAGTTCAGC GCTCATTACCGTCAGTTGCCATGGGCACGGGTGATCAGCTCCGGCTACATGGTCAGCGAGCGCTTGCGCCAGGAAGGTTTCGATGCGGTGTTCGTGCCCA AGGGCTATGACGAGCAGTTGCTGGCCGACCAAGGGCGTGAGCGTGATATCGAACTGGCCTTTGTCGGCAGCGTCAACAGCGTGGCCTACAGCGGCCGCAA GGCACTGCTGGACGAGTTGGGGCAGGTCGAGAACCTGCTGGTAACCCGTACCAAGTCGGGCGAGGACTACTGCAACACGCTCAACCGTATTCGTTTCTTC GTCAGTGCCGATGTCGGCATGGGCGAATACATGATCAAGAACTTCGAAGCCATGGCCTGTGGCTGTGTGTTGCTGGCATACGACCAGGGCGAGGAAGAGA ACCGTGCGCTGGGCCTGCAAGACATGCACAACGTGGTGTTCTATGACAACATCCCGACCCTTCAGGAAAAACTCCGTCGCTTGCGCGCCAACCCCGAGCT AGCACGGCAGATTGCAGAAAATGGCCGCCATCTGGCGGTTTCCCGTTTTAGTTTCGGCGCAGTTGGACGTAGCATCGTCGACCACATGCGCCCGGCGCTC AGGCCCCATCCGCCATTGTCTGCATGGCAGCGGCTGCGTCTGAAGCTGGGCATCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATAAGAGCTTTCACGCCCAGGAGCGGGTTGTTGAAGGCCGATAGTCGTAATGCGGAGGGAATCCGGTGCGCTTTTCAAATGAGAGTGACGTCACGCTTGT CGTGACCAGTTGTGGGCGGTTCGATCTGCTCAAAGACACCCTTGAGAGTTTCGATCGCTACAACACCGCGCCCATTCGCGAGGTATTCATCACCGAAGAC TCTGGCGACGATGCTGTGCATGCCGCTGTGCCGGCGCACTGGAAGCCGCACTGCAAGGTGTTCGTGAACCGGCCCAAACTTGGCCAGTTGCCGTCTATCG ACCTGGCCTACAGCCAGGTCAAGACGCCGTACATTTTTCACTGCGAAGACGACTGGCAATTCTATCGCCAAGGCTTTGTCGAAGACTCGCAGGCCATCCT GGATGTCAGCCCCAACCTCTTGCAGGTCTGGTTGCGCAGCCATGCCCACGACCTGGCCATCCACAGCCCGTACATTCATTTGGGCGATCGCCAGGTGATC
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| Amino Acid Sequence |
>hypothetical protein
MKVLFLVQKEQRAILDRLYDGVAANCECDLRWLTSQDQRNLRRYFKREVQVERYDRIVFFLRFKQEIRQVAFIRTVPNLVILEHDAYQNYIPCKYTGKFS AHYRQLPWARVISSGYMVSERLRQEGFDAVFVPKGYDEQLLADQGRERDIELAFVGSVNSVAYSGRKALLDELGQVENLLVTRTKSGEDYCNTLNRIRFF VSADVGMGEYMIKNFEAMACGCVLLAYDQGEEENRALGLQDMHNVVFYDNIPTLQEKLRRLRANPELARQIAENGRHLAVSRFSFGAVGRSIVDHMRPAL RPHPPLSAWQRLRLKLGI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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