Pseudomonas putida YKD221, TR32_RS08730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGTGATCCTGGAAACCCTGACCGCACTGGGCACCCAGCAGATCATGGCCCAAGCCTACCTGCCGGCAATCAAGGACGGCGACAAGCGCATCCTGATGATC GATGGCGAGCCAGTGGACTATTGCCTGGCACGCATTCCGGCCAGCGGCGAAACCCGTGGCAACCTGGCCGCGGGCGGGCGTGGCGAAGCCCGCCCACTGA CCGAGCGCGACCGCTGGATCGCCGCCCAGGTCGGCCCGACGCTGCGCGAGAAGGGCCTGCTGTTCGTTGGCCTGGACGTGATCGGCGACTACCTCACCGA AATCAACGTCACCAGCCCCACCTGTATCCGCGAGATCGATGCCGCCTACAACACCGATATCGGTGGCAAGCTGATGGATGCCATTGATCGCAAGCTCAAA GCACGCTGACAGCCAACGCGAAGTAAAGCCGTAGAGTGGGGTATGATGCCGGTCCTATTCGACTGAGCTGCTGCCCCGCCCTGCGGTTGCTGGATACCTG
DNA Sequence for Gene
>TR32_RS08730
ATGACGCTGCCCGCTGACGTCCCTGCCGACCTGCTGCCTCCCCGTGTTCGCCCTGCGGACCGGCTTGGCTTCACCCTGTTCCTGGCTGCGCTGGTGCACC TGGCGCTGATCCTTGGCGTCGGCTTCACCGTGGTCAAGCCTGCCGAAATCCGCCACACCATGGACATCACCCTGGCCACCTTCAAGAGCGAGAAACCGCC CGAGAAGGCTGACTTCCAGGCCCAGGACAACCAGCAAGGCAGCGGCACCCTGGACAAGAAAGCGGTGCCCAAGACCACCGAGCTGGCGCCGTTCCAGGAC AGCAAGATCAACAAGATCACCCCACCGCCTGCGGCCAGGCCCGAGGTGGTCCCACCCCCTCCCCCGAAAAAGTCGGCGGTGGTGACTACTGCGCCCAAGC CGCACAAGGTCGAACCCAAACCCAAGGAAAGCAAAGCACAGCCCAAGCCAGCCACACCGACGCCGGACTTCGACAGCTCGCAGTTGTCCAGCCAGATCGC CAGCCTGGAAGCGGAGCTGTCCAACGAACAGCAGATGTACGCCAAGCGCCCGCGCATCCATCGCCTGAACGCCGCGTCGACCATGCGCGACAAGGGCGCC TGGTACAAGGAAGAGTGGCGCAAGAAGGTCGAGCGCGTGGGTAACCTGAACTACCCCGATGAAGCACGCCGACAGCAGATCTACGGCAACTTGCGCATGA TGGTGTCGATCAACCGCGATGGCTCGCTGTACGAGGTACTGGTGCTGGAATCGTCCGGGCAGCCCGTGCTGGATCAGGCGGCGCAGCGCATCGTGCGGCT GGCCGCGCCGTTTGCACCGTTTACCGGTGATCTGGCCGAGTTCGACCGGCTGGAGATCATCCGCACCTGGCGCTTTGCCCGTGGGGACCGTTTGTCCAGT AATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTCAGCCTTGGTGTAGGGCTTTCGGTGCGTGCTAGCGCGGATATCGAGCGCCGCGCGGGCGGCGCTCGATCTCAAAAGCGCCAAAAACCTCAAGCCAAG CGCCAACCTGACGACACAAATCCGCACCTTGTCAGTCTCGCCACCTGGCGCCACACTATCCCCCATGAAAACCCTCGCACCCAGCTACCTCAAGCACCAG TTCCTGATCGCCATGCCGCACATGGCCGATCCGAACTTCGCCCAGACCCTCACGTATATCGTCGAGCACAATGAGCATGGCGCCATGGGCCTGGTGGTCA ACCGACCACAGGAACTGAGCCTGGCCGACATCCTCGAGCAGCTGCGCCCGGACGAAACGCCGCCGGCCAGCACCTTGCAGGTGCCGATCTACCAGGGTGG CCCGGTACAAACCGACCGCGGCTTCGTGCTGCACAGCAGCGAGTGCAGTTTCCAGGCCAGCGTGGCGCTGGAAGGGCTGTCGCTGACCACGTCACAGGAC
Amino Acid Sequence
>cell envelope biogenesis protein TonB
MTLPADVPADLLPPRVRPADRLGFTLFLAALVHLALILGVGFTVVKPAEIRHTMDITLATFKSEKPPEKADFQAQDNQQGSGTLDKKAVPKTTELAPFQD SKINKITPPPAARPEVVPPPPPKKSAVVTTAPKPHKVEPKPKESKAQPKPATPTPDFDSSQLSSQIASLEAELSNEQQMYAKRPRIHRLNAASTMRDKGA WYKEEWRKKVERVGNLNYPDEARRQQIYGNLRMMVSINRDGSLYEVLVLESSGQPVLDQAAQRIVRLAAPFAPFTGDLAEFDRLEIIRTWRFARGDRLSS N
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site