Strain | Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGACCTGGAGTGTGCGCCGTTCATTGCGTCGGGCCGCCAGCAAGGGCCTGGACGTGCGTCTGTTGTTGACCGGTCCGCGCACCGATCACCCCTCGGTACG CTACGCCGGGCATCGGTACTACCCGCGTCTGTTGCGTGCGGGTGTGCGGATTTTCGAGTACCAGCCGTGCTTCCTGCACCTGAAGATGGCGGTGGTAGAC GACTGGGTCAGCGTCGGTTCATGCAACTTCGACCACTGGAACTTGCGCTTCAACCTTGAAGCCAACATCGAAGCGCTGGACCCGCCGTTGACTGCGGCGG TGGTGGCCAGCTTCGAGCGCGACTTCGCCCAGAGCGAGGAAGTCGACCTCGCCCACTGGCATGCGCGCCCTTTGTGGCGCAGGGTGAAGCAACGGATCTG GGGCTGGCTTGATCGGTTGGTGGTCAACTTCCTCGACCGCCGTGACTGACAGCGGCTATCGTGCAGTGACTATTCACAGTTAACCGAAGGAGTGGGCGAG
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DNA Sequence for Gene |
>TR32_RS15095
ATGACGGCGAAGAAAATTCTCATGCTGGTGGGCGACTACGTCGAAGATTACGAAGCGATGGTGCCGTTCCAGGCCTTGAGCATGGTGGGCCACACGGTGC ATGCGGTGTGCCCGGAAAAGCTGGCGGGGCAGACCGTGCGTACCGCGATTCATGACTTTGAGGGTGAACAGACCTACAGCGAAAAGCCAGGGCACAATTT TGCCCTGAATTATGATTTCGTGCGGGTGCGGCCCGAGAGTTATGACGCGCTGCTGATCCCAGGTGGCCGCGCGCCGGAGTACCTGCGCCTGAATGAAAAG GTGTTGGACCTGGTGCGGGCGTTCGACCAGGCCGGCAAGCCGATTGCGGCGGTGTGCCATGGGGCCCAGCTGCTGGCAGCGGCAGGGGTGCTGGAGGGGC GTGAGTGCAGCGCGTACCCGGCATGTGCGCCAGAAGTGCGCCTGGCGGGTGGCACGTTCATCGACATCGCGGTGGACCAGGCGCATGTGGATGGCAACCT GGTGACCGCACCGGCATGGCCCGCGCACCCGGCCTGGCTGGCGGCGTTCCTTCAAGTGCTGGGCACGCGCATTGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGGCTTGATTGAATTGGCAGCGGGTTGCTTCAGGCAACCTGCTCAACCCAGTCATTGAGGTTGTAGTAGTTGGTCACCCGGGCAATCTTGCCACAGTGA ATATAGAAGAACGCCCCCGCCGGTAGCACATAGGTTTGGCCGTTTGCCGTCGGCAGCCCTTCGTCATCGGCCAGGTATTGGCCATGCACGGTGAACTCCG CTGCCGCGCGGCTGCCATCGGCGTTCTGCATCACCACGATGTCGGCCAGGCGCTCGCGGTAGCAGCGGTTCATCTTGTCCATGAACGCGGCGAACCTGGC CTTGCCCATCTGACGCTCGCCCTGGTTGATGTCGTGGATCACGTCTTCGCTGAGCAGCGCCAGAAAGCCCGGCATGTCACCCGCGTTGAAGGCGGCGTAG TAAGCATTTACCAGTTCGGTTGCGGTCATGGAACATTTCCTGTCGTGTAGGGAAAAGGCGGGTCGTTACCTCGGATGATAGGGTTTCCCCTCAAGCCCGG
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Amino Acid Sequence |
>glutamine amidotransferase
MTAKKILMLVGDYVEDYEAMVPFQALSMVGHTVHAVCPEKLAGQTVRTAIHDFEGEQTYSEKPGHNFALNYDFVRVRPESYDALLIPGGRAPEYLRLNEK VLDLVRAFDQAGKPIAAVCHGAQLLAAAGVLEGRECSAYPACAPEVRLAGGTFIDIAVDQAHVDGNLVTAPAWPAHPAWLAAFLQVLGTRIV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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