Pseudomonas putida YKD221, TR32_RS14620

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCTGATCTGGATGGCAATCATGATGTACCAGATCAACAAGCACGGCATCACGCCGACCGCCAAGACCCGCATGAGCTGCCTGAGCCTGTTCTGGCACTTC CTGGACGTGGTCTGGATCTGCGTATTCACCGTCGTTTACCTGCTGGGGGTTCTGTAATGGCTAACGCACACGACACTCATCACGAAGGTAATCACGGCAG CGTCAAGTCGTACATGATCGGTTTTGTACTGTCGATCATCCTGACTGCGATCCCGTTCGGCCTGGCCATGACTGCCAGCCTGCCGAAGAACCTGACCGTT CTGATCATTGTTGCCATGGCCGTGATCCAGGTAGTTGTTCACCTGGTTTACTTCCTGCACATGGACCGCTCGAAAGAGCAACGCAACAACGTTTCGACGT TCCTGTTCACCACCCTGGTGATCGCTCTGCTTGTCGGCCTGTCGCTGTGGATCATGTTCAGCATCCACTTCGAAATGTTGGCCAAGTGAGGTAAGACTGC
DNA Sequence for Gene
>TR32_RS14620
ATGTCCGTTAAGCACTTTATCCAAATCACCAAACCGGGGATCATTTTCGGTAACGTGCTTTCCGTGGCAGGCGGTTTCTTCCTTGCCTCGAAGGGCCATG TGGATTTCGCCCTGTTCCTGGCGGTGGTGATCGGTACTTCGCTGGTGGTTGCGTCCGGATGCGTGTTCAACAACTGCATCGACCGTGACATCGACCACAA GATGGAGCGCACCAAGAACCGCGTCATGGTCCAGGGCGGCATGTCGCTGCCCCTCGCGCTGATCTACGCCACCCTGCTCGGGGTGGCGGGTTTCAGCCTG CTGTATGTCCAGGCCAACCCGCTGTCTGCGTTCTGCGCACTGATTGGCTTTGTCGTCTATGTCGGTTTCTACAGCCTGTGGCTGAAGCGTAAATCGGTGC ACGGCACCTTGGTCGGCAGCCTGTCCGGTGCCATGCCTCCGGTGATCGGCTACTGCGCCGTGAGCAACAGCTTCGACCTGGCTGCGGTAACCCTGCTGGT GATGTTCAGCCTTTGGCAAATGCCGCACAGCTTTGCCATCGCGATCTTCCGCTTCAAGGATTACAGCGCTGCCAACATTCCGGTCCTGCCGGTGGCACGT GGCATCCTCGCGGCGAAGAAGCAGATTGTGCTGTACGTGCTGGCCTTTGTGCTCGCCACCTTGATGCTCACCCTCGGCGGTTACGCCGGCCTCGGCTACC TGGCCGTGGCAGCAGCCATGGGCCTGTACTGGCTGTACATGGCCTGGGGTGGTTACAAGGCCGAGGACGACAGCAAGTGGGCCCGCAAGGTGTTCGGCTT CTCCATCCTTACCGTCACTGCCCTGAGCGTGATGATGGGGGTGGACAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTGGGTATTTTTTCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAA GGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATGCCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGG AAATTATCCTTTACAGGGATCATGTTTCGGCACTATCTTCTGATCCAGGCCGCCACATCGGCCAACGTCGCTCGGACGGTTCCGGGCGCTTACGTCCTCA GAGGAAGCCATGGCCAACCCAGGTTCGCCGCGCCGCTTTGCGCGCATCGATCGTCTCCCCCCTTACGTCTTCAACATCACTGCCGAGCTCAAGATGGCCG CCCGCCGCCGTGGCGAGGACATCATCGACCTGAGCATGGGCAACCCCGATGGCGCCACCCCGCCGCACATCGTCGAGAAGCTGGTACAGGTCGCCCAACG
Amino Acid Sequence
>protoheme IX farnesyltransferase 2
MSVKHFIQITKPGIIFGNVLSVAGGFFLASKGHVDFALFLAVVIGTSLVVASGCVFNNCIDRDIDHKMERTKNRVMVQGGMSLPLALIYATLLGVAGFSL LYVQANPLSAFCALIGFVVYVGFYSLWLKRKSVHGTLVGSLSGAMPPVIGYCAVSNSFDLAAVTLLVMFSLWQMPHSFAIAIFRFKDYSAANIPVLPVAR GILAAKKQIVLYVLAFVLATLMLTLGGYAGLGYLAVAAAMGLYWLYMAWGGYKAEDDSKWARKVFGFSILTVTALSVMMGVDSQTAADVLMTYAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site