Pseudomonas putida YKD221, TR32_RS18200

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00512	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00512	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:6.10.250.3020	-	-	-	50	111	1.1E-8
Gene3D	G3DSA:1.10.287.130	-	-	-	384	471	7.4E-18
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	609	622	1.3E-11
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	408	476	8.8E-6
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	554	568	1.3E-11
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	572	582	1.3E-11
Pfam	PF02743	Cache domain	IPR033479	Double Cache domain 1	50	228	1.0E-14
Coils	Coil	Coil	-	-	344	399	-
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	392	474	3.53E-9
PIRSF	PIRSF036431	HK_DctB	IPR017055	Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator)	8	632	0.0
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	195	311	6.1E-25
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	115	193	5.6E-28
SUPERFAMILY	SSF103190	Sensory domain-like	IPR029151	Periplasmic sensor-like domain superfamily	79	203	9.94E-14
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	406	472	1.22473E-5
Pfam	PF00512	His Kinase A (phospho-acceptor) domain	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	410	474	2.1E-6
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	516	623	3.3E-19
CDD	cd12914	PDC1_DGC_like	-	-	95	195	3.6462E-10
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	481	623	1.44E-32
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	472	624	4.8E-34
PANTHER	PTHR43065	SENSOR HISTIDINE KINASE	-	-	203	629	9.3E-47
FunFam	G3DSA:1.10.287.130:FF:000049	C4-dicarboxylate transport sensor protein DctB	-	-	384	471	3.8E-32
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	585	603	1.3E-11
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	515	625	3.4E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.