Pseudomonas putida YKD221, TR32_RS19740

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCGCTGCACGACATGTCACAGCTCAGCAACGCCCTGTCTGTCGAATCCGCCCCACCCGCGCGTCAACAGGCGCCCGATGCGCCAGTGGTAAAAAGCCTC GACGGCCAACAGGTCAAACTACCCGGCTACATCGTGCCACTGGAGGTCAGCGAAGAAGGCCGCACCACCGAGTTCCTGCTGGTCCCTTACTATGGCGCGT GCATCCACGTGCCGCCGCCACCGCCGAACCAGATCGTGCACATTTTCAGCGAGATGGGCGTGCGCGTCGAAGACCTCTACCAGCCCTACTGGATCGAGGG AAAGATGCAGGTTAGAGCTTCCAGCAGCGAGTTGGCCGACGCCGGCTACCAGATGGAAGCCGAGAAAATCTACGCTTATGAGCTGAGATGAGAACTGTTT CGAATTCGTGAAGACGCTTCTTTGAGCTGGGTCAAACTTTCCGTTTAACCAGCTCCGTACCATTGGACCACTCGATTAATAACGTCCTTTGGGAGCTTCC
DNA Sequence for Gene
>TR32_RS19740
ATGAACAAGTCCTTGCTGGGTGCCTCGCTTGTGGCCCTTGCGCTCGCCGCCCCTGCCGCCCACGCCTATCAGGCGGGGGACATGATCCTGCGCGCAGGCG CCATCACCACCGCCCCGAACGAGAGCAGCGGCGACCTCAAGTTTGACGGTAACAAGGTGTCGGGCACCAAGGCGACCCTGGACAGCGATACCCAGTTGGG CCTGACCTTTGCCTACATGCTCACCGACCACATCGGCCTGGAGCTGCTGGCAGCTACCCCGTTCAAGCACACCGTCGCCGTAAAAGGCCTGGGCGGCGGG CTGGACGGCAAGCTGGCAGACATCAAGCAACTGCCACCGACGCTGTCGCTGCAGTACTACCCAATGGAACCGAATTCGCGCTTCCAGCCGTACGCTGGCG TCGGTATCAACTACACCCTGTTCTTTGACGAAGACTTGAGCAGCGCACGCAAGCAACAAGGCTTCAGCAACCTCAAGCTGCAGGATTCGGTAGGTATCGC CGGCCAACTGGGCATGGACTACTTGCTGACCGACAACCTGCTGGTAAACGCCTCGGTCTGGTACGTCGACATCGACACCAAGGCCAGCGTCAACGGCCCG ACCGCCCTTGGCTACAGCAAGACCAAGGTCAACGTCGACGTCGACCCATGGGTATACATGGTCGGCCTTGGCTACAAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGAACATTGCAGGGCGGCTTCGGCCGCCCTCGCGCGTTGCAGCCATAGCCAGTAGCACAGTGCGACGGCACTGATGCCCATGCCAAGCCCACACACGG CAACCCAGCCCCAGTGTGCATACACCCAGCTCGCCAACACCGCCCCCAAACCGCTGCCCAGCGAATAGCAACACATATAGGCGCCGATCAAACGGCTAGC CATCGCACCACGCCCCGCCAGCAACAGGCTCTGGTTGGTGACATGCACTGCCTGCACGGCAAAGTCCAGCATCAGCACACCCAGCACGAAGGCCAGCAGT GAATGCTCGACGAACGCTGTTGGCAGCCACGACAGCGTCAGCAGGGCCAACGACACCCCGGTCGTACGCTCACCCCTTCCAAGGTCGGCCAGACGACCGG CATGCGAAGCCGCCAGCGTACCCGCGACACCTGCCAGGCCAAACAGGCCGATCTCGGTATGGCTCAGCGCCAGCGGCGCAGCACTGAGCGGCATGACCAT
Amino Acid Sequence
>outer membrane protein W
MNKSLLGASLVALALAAPAAHAYQAGDMILRAGAITTAPNESSGDLKFDGNKVSGTKATLDSDTQLGLTFAYMLTDHIGLELLAATPFKHTVAVKGLGGG LDGKLADIKQLPPTLSLQYYPMEPNSRFQPYAGVGINYTLFFDEDLSSARKQQGFSNLKLQDSVGIAGQLGMDYLLTDNLLVNASVWYVDIDTKASVNGP TALGYSKTKVNVDVDPWVYMVGLGYKF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site