Pseudomonas putida YKD221, TR32_RS22195

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida strain YKD221, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCCGCTCCTACACCGATGGCGCTGGATCACACTCGCCTCAGGCCGACGCCCCCCCCATTGTAGGAGCGGGCTTGCCCGCGAATCAGGCGGCGCGGTGGA TGGCACCGGCTTCGCCGGTGTTCGCGGGTAAACCCGCTCCTACACCGATGGCGCTGGATCACACTCGCCTCAGGCCGACGCCCCCCCCATTGTAGGAGCG GGCTTGCCCGCGAATCAGGCGGCGCGGTGGATGGCACCGGCTTCGCCGGTGTTCGCGGGTAAACCCGCTCCTACAACGACGGCGCTGGATCACACTCGCC TCAGGCTGACACGCCCCGTTGCAGGAGCGGGCTTGCCCGCGAATCAGGCAGCGCTGGCCTGCCTGAGTGGTAGACCATTCTTGAATTACTTCAATCTTGA ATTTTTTTATTAAGTCAAGATCCACCCTGTTCAAATCCTTCCCAGCGTGCTACAAACTGGTTAAGCAATGATCTAGCTGCTTGATAACGAAGGGAAAAAT
DNA Sequence for Gene
>TR32_RS22195
ATGACGAAGTCGGAGCTGATCGAACGTATTGTCACCCATCAGGGGCTGCTCTCCTCCAAGGATGTGGAGCTGGCCATCAAGACCATGCTTGAGCAGATGT CGCAATGCCTGGCTACCGGCGATCGCATCGAGATCCGCGGTTTTGGCAGCTTCTCGCTGCACTATCGCGCCCCCCGCGTGGGCCGTAACCCGAAGACCGG CCAGTCGGTCAGCCTCGAAGGCAAGTTCGTGCCGCACTTCAAGCCCGGCAAAGAGCTGCGTGATCGGGTCAATGAAGAAGACGAGGCTGAAGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCTACCAAGGAGAGAATTCTGATGCGTAACCTCAAGCGCGCCCTGGCGGCAGTGTTCGTGCTGCTGTTGGCGGCTGTGGTGCTGTTCTTCGTGCTGGAGA ACCAGCAAGCCGTGTCATTGGTCCTGTTCGGTTGGGCTACGCCAGCCATGCCGGTTGCTGTTCTGGTATTGGCTGCCTTGGTCATTGGCCTGGCGGTCGG GCCGTTGCTGGGGGCTTACGGCGTGCAGCGCAGCAAGCGCAAGATCAGGGCTTCTGCCCGTCAGGCGGCACTGAACGGCAACTAAGGAAGTTTCCTACAC CTACTAAAGAAAGGTTCACCTATGCATGCGTCGGCCGTCATGGAGTAATAGTCCACTTCATTTTCGGTCCAGGCGAGTGTGCGCAGCATGGAATATCCCA GCCTTTCCCATCACGGTGGTACCCGGGGTGTCACCGGGTCCTGTCACCAGCTGCACCTCGGCCCATCCACCAGTTTGCTGGTCGACTGCGGGCTGGAACA
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLEGKFVPHFKPGKELRDRVNEEDEAEA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site