Strain | Pseudomonas putida strain DLL-E4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGCGGTGAACATCCCGCAGGACAAGCTGGTCAACCGCATGAGCGAGCTGGACAAGCACAAAGAGAAGACCCTGATCGTCGTCGACTCGATGGGCCAGCAG TCCGGCACCATCTGCCGCGAGCTGCTCAAGGCTGGTTACAACGCCGCCAAACTGAGCGGTGGCGTTTCCAGCTGGAAAGCCGATAACCTGCCCCTGGTGA AGTGATATGAAGCCCGTCATCGTCTATTCCAGCGACTACTGCCCCTACTGCATGCGCGCCAAGTACCTGCTCGAGAGCAAGGGCGTGGCCTTCGAGGAAA TCAAGGTCGACGGCAAGCCACAGGTTCGTGCCGAGATGAGCCAGAAGGCCGGCCGTACATCTGTGCCGCAGATCTGGATCGGCAGCACCCACGTCGGTGG ATGCGATGACCTTTATGCCCTGGAGCGCGCCGGCAAGCTCGACGCGCTGCTGGCGGCCTGATTTGCACTGCATTCAAAAACATTAGGATAAGGATCTGCC
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DNA Sequence for Gene |
>DW66_RS26615
ATGACTGACCAACAGACCAACGGCGCTGCTGCAGAAGACAACAGCCCTCAGTTCTCCATGCAGCGCATCTATGTGCGCGACCTGTCGTTCGAAGCCCCGA AAAGCCCGCAGATCTTCCGCCAGACCTGGGAGCCGAGCGTTGCCCTGGACCTGAACACCAAGCAGAAAGCCCTGGAAGGCGACTTCCACGAGGTGGTACT GACCCTGTCGGTTACCGTCAAGAACGGTGACGAAGTGGCCTTCATCGCTGAAGTGCAGCAGGCCGGTATCTTCCTGATCAAGAACCTGGACGCGGCTTCG ATGAGCCACACCCTGGGTGCGTTCTGCCCGAACATCCTGTTCCCGTACGCCCGCGAGACCCTGGACAGCCTGGTGACCCGCGGTTCGTTCCCGGCCCTGA TGCTCTCGCCGGTCAACTTCGACGCCCTGTACGCGCAAGAAATGCAGCGCATGCAGGAAGCCGGCGAAGCGCCAACTGTGCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAGCTGCATTTGAAAAAGGGCGACTTCGGTCGCCTTTTTTGTTGGCCTGTTCCGGCCCTATCGCCGGCAAGCCAGCTCCCACAGGTACTGCACAGGTTTC AAGGCTGGTGCGGTCCCTGTGGGAGCAACTGTCTTTAGAGATTTATTTTCAAGCGTGCCATTCGGGCAGGGCTTCGCTCGATACCGCGTAGCGGTGTCGC TGGCGAAGCCCGCATTTGTAGAAAATCGATCCTCGTTCGTGATCAGGGTGCGGGTACCTGAGGCTTGAGCTCTTTCCACTCCGTTCCGTCACGCAGCATT GCGTTCAGGCGCACCAGCAACACGCGCATGCACGCCACTGCGGCAACTTTTGCGCGCTTGCCTCGGGCTATCAGGGCTTCATAGCGGGTTCTAACTTCTG GGACATGCTGGATCATTGACCAGATCGACATGTAGGCCGCCTTGCGGACTCTGTAACGCCCGCCTTCGATCTTCCTCGGGCCACTCTTCTTGCCGCTGTC
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Amino Acid Sequence |
>protein-export protein SecB
MTDQQTNGAAAEDNSPQFSMQRIYVRDLSFEAPKSPQIFRQTWEPSVALDLNTKQKALEGDFHEVVLTLSVTVKNGDEVAFIAEVQQAGIFLIKNLDAAS MSHTLGAFCPNILFPYARETLDSLVTRGSFPALMLSPVNFDALYAQEMQRMQEAGEAPTVQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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