Pseudomonas putida DLL-E4, DW66_RS21145
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain DLL-E4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGGCCACCGGCGACACCACCCGTGCGCCTTGGGGCGCCGAGGACCTGGCACGCTTCACGCGCCTGGTACAGGACGCGGTCGGCTTCGATGCCAGCCGT GGCGACAGCGTGACGGTGATCAACGTGCCGTTCGCCGCCGACCGTGGCGAAGAGATCGCCGATATCGCCTTCTACCAGCAGCCGTGGTTCTGGGACATCG TCAAGCAGGTGCTGGGCGTGGTGTTCATCCTGGTACTGGTATTCGGTGTGTTGCGGCCGGTACTGAACAATATTACAGGGGGCGGCAAGCAGGCTGCCCC GGACAGCGACATGGAGCTGGGCGGCATGATGGGTCTGGATGGCGAACTGGCCAACGACCGCGTCACTCTGGGTGGCCCGACAAGCATTCTGCTGCCTAGC CCCAGCGAGGGTTACGAGGCACAGCTCAACGCAATCAAAGGCCTGGTGGCCGAAGACCCGGGCCGCGTTGCCCAGGTCGTGAAAGAGTGGATCAACGCCG
|
|
| DNA Sequence for Gene |
>DW66_RS21145
ATGAGTGACAACCGAGCCGTTACCGCCAAGCTGAGCCGCGTCGACAAGGCGGCAATCCTCCTGCTTTCTTTGGGCGAGACCGACGCGGCCCAGGTGCTGC GGCACATGGGGCCAAAGGAAGTACAGCGGGTGGGTGTGGCCATGGCCCAGATGGGCAATGTGCACCGTGACCAGGTCGAGCAGGTGATGAGCGAGTTCGT CGAAATCGTCGGCGACCAGACCAGCCTGGGCGTGGGCTCCGATGCCTACATCCGCAAGATGCTCAACCAGGCACTGGGCGAGGACAAGGCCAACGGCCTG GTCGACCGCATCCTGCTCGGTGGCAACACCAGTGGCCTGGACAGCCTCAAGTGGATGGAGCCGCGCGCCGTTGCCGATGTGATCCGCTACGAGCACCCGC AGATCCAGGCCATCGTGGTCGCCTACCTCGACCCCGACCAGGCCGGCGAAGTGCTGAGCAACTTCGACCACAAGGTGCGCCTGGACATCGTCCTGCGCGT GTCGTCGCTGAACACTGTGCAACCGGCGGCGTTGAAGGAGCTGAACCAGATCCTCGAGAAGCAGTTCTCGGGCAATTCCAATGCGGCACGTACCACCTTG GGTGGCATCAAGCGCGCCGCCGACATCATGAACTTCCTCGACAGCTCGGTGGAAGGTGCGCTGATGGACGCGATCCGCGAGATCGACAGCGACCTGTCGG AGCAGATCGAAGACCTGATGTTCGTCTTCAACAACCTGGCCGATGTCGACGACCGTGGCATCCAGGCGCTGCTGCGCGAAGTCTCGTCCGACGTGCTGGT GGTATCGCTCAAGGGCGCCGACGAGCGGGTCAAGGACAAGATCTTCAAGAACATGTCCAAACGTGCCTCGGAGCTGTTGCGCGACGACCTGGAGGCCAAG GGGCCGGTGCGGGTCAGCGACGTGGAAACGGCGCAGAAGGAAATCCTCACCATCGCCCGCCGCATGGCCGAGGCCGGCGAGATCGTGCTCGGCGGCAAGG GTGCCGAGGAAATGATCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGTCTTCGCGATCTGAAGGCCGACGCCGCCCCTTGTGGGAGCGGGTTTACCCGCGAAGGCGTCGGACCTGGCGATAGAGGTTGTCGCTGCCGACGCATTC GCGGGTGAACCCGCTCCCACAGGGACCGTGTCGGCTGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACATCACCCCAGCGACCTGATCCGC GCCCGCGACCTCGAAGGCGTGGACGTATGGGCGCTGCCCAGCTTCGACCCGGAACCCGAGCCTGAGCCCGAACCGGAGCCGGAGCCCGAGGTAGTCGAGG AAGAAGTCGAGGAAGTGCCGCTGGAAGAAGTCCAGCCACTGACCCTGGAAGAACTCGAGGCCATCCGCCAGGAAGCCTACAACGAAGGCTTTGCCACCGG TGAGCGCGAGGGCTTCCATAGCACGCAGCTCAAGGTCCGCCAGGAAGCCGAAGAGGCCCTGAAGACCAAGCTGGAAAGCCTCGACCGGCTGATGACCAAC
|
|
| Amino Acid Sequence |
>flagellar motor switch protein FliG
MSDNRAVTAKLSRVDKAAILLLSLGETDAAQVLRHMGPKEVQRVGVAMAQMGNVHRDQVEQVMSEFVEIVGDQTSLGVGSDAYIRKMLNQALGEDKANGL VDRILLGGNTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAGEVLSNFDHKVRLDIVLRVSSLNTVQPAALKELNQILEKQFSGNSNAARTTL GGIKRAADIMNFLDSSVEGALMDAIREIDSDLSEQIEDLMFVFNNLADVDDRGIQALLREVSSDVLVVSLKGADERVKDKIFKNMSKRASELLRDDLEAK GPVRVSDVETAQKEILTIARRMAEAGEIVLGGKGAEEMI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|