Pseudomonas putida DLL-E4, DW66_RS21060 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain DLL-E4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAGGTGCTGCAGGCGCTGTTGTCGGAACAGGTGCCCGTACGCGATATCCGCAGTATCGCCGAGGCGATCGCTAACAACGCCGGCAAGAGTCAAGATACCG CCGCGCTGGTGGCGGCGGTGCGCGTCGGATTGTGTCGCGCCATCGTGCAAAGCATTGTCGGCGTTGAGTCGGAGCTGCCAGTGATTACCCTGGAGCCAAG GTTGGAACAGATTTTGCTCAATAGTCTGCAAAGGGCCGGGCAAGGTCAGGAAGACGGTGTTCTTCTGGAACCGAGCATGGCCGAGAAGCTGCAGCGTTCG TTGATCGAGGCGGCCCAGCGCCAGGAAATGCAGGGCCAACCGGCCATCCTCCTGGTCGCCGGCCCGATCCGCGCCATGCTGTCGCGTTTCGGTCGTCTGG CTGTACCGAATTTGCATGTTCTGGCGTATCAGGAAATACCGGACAACAAGCAAGTCACCATCGTTGCCACCGTGGGCCCTAACGGCTGAGGTAGGGGATA
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| DNA Sequence for Gene |
>DW66_RS21060
|flhF
ATGCAAGTTAAGCGATTTTTCGCCGCCGATATGCGTCAGGCCATGAAGCTGGTCCGTGATGAGCTGGGCGCCGATGCCGCCATCATCGGCAACCGTCGCA TCGCCGGCGGTGTCGAACTGACGGCCGCGCTGGACTACAAGCTGTCTGCCCTGGCCCCGCGTGTGCCCAACGCCGAACTGGAAGAAGAGCTGCGCAAGAC CCATACGCGCATCGCCACTGCCCAGGCCGAACTGGATCATCGTCAGGACAGCAGCGACAACAACCGCCAATTGTTCGCCGGGCAGTCGCTGACCGCCGCC GAGCCGTTGGTCGAACCGCACATCGATGCGCCCGAGGCCGCTGCGCCAGCCCCTGCGTCGGCGCCGGTCGATCCGCGCCTGTTCGATGCCATGCGCTCCG AGCTTTCGGGCCTGCGCGAGCTGCTGGAAGTGCAGCTCGGCTCGCTGGCCTGGAACCAGCTGCAAGGCAGCAAGCCGCAGCAGGCCACCGTCTGGCGCCG GCTGCAGCGCATCGGTCTGTCCGGGCCGATCGCCCGTGAGCTGCTGGACCTGACCGCCGAGATCGACGAGCCACGTCAGGCCTGGCGCATGTTGCTGGCG CATCTGGCGCGGATGATCGAAATCCCCGAGGTCGAGCCGATCGAAGAGGGTGGGGTGATCGCCATGGTCGGCCCGGCCGGCATGGGCAAGACCACCACCC TGGCCAAGCTGGCCGCCCGCTACGTGCTCAAGTACGGCGCGCAGAACCTGGCGCTGGTGAGCATGGACAGCTTCCGCATCGGCGCCCAGGAGCAGCTCAA GACCCTGGGCCGCATCCTTAACGTGCCTGTGACCTACGTCGACCCGGGCCAGTCGCTGGCCGCGGCGCTGGAGCCGCTGCTGCGCAAGCGCGTGGTGCTG ATCGATACCGCTGGCCTGCAGGCCAGTGACCCGGCCCTGCGCATGCAACTTGAAACCCTGGCCGGGCGTGGCATTGCCGCGAAGAACTACCTGGTGCTGG CCACCACCAGCCAGAAGCAGGTGCTGACTGCTGCCTACCACAGCTACAAGCGCTGCGGCCTGGCTGGTTGCATCCTGACCAAACTCGATGAAACGGCGAG CCTTGGCGATGTGCTGAGCCTTGCCATCAGTCATGAACTGCCAGTGGCCTACCTGACCGATGGGCCGCGCATTCCTGACGACCTGCACCTGCCTCGGGGG CACCAGTTGGTCACCCGCGCGGTCAATGTGCAGCAGCAGGACGAGCCCAGCGAAGAGGCCATGGCCGACATGTTCGCTGATCTCTATCACAACCCACGGC GAGCGGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGATGAAGTGTGTGCAAGGTAGCTATGCCAAAGGGTACGCAGAATTGCCCTACGTGTGGCCTGAGTCCCAGCGAGACAAGGTAAAGAACAGACATGGGTA GCATGCATCCCGTACAGGTGATCGCCGTGACCGGTGGCAAAGGTGGCGTCGGCAAGACTAACGTTTCAGTGAACCTGTCCCTGGCGCTGGCCGAGCTTGG CCGCAGGGTCATGCTGCTCGACGCCGACCTGGGCCTGGCCAATGTCGACGTGCTGCTGGGCCTTACCCCCAAGCGGACCCTGGCCGATGTCATCGAAGGG CGCTGCGAATTGCGCGACGTGATGTTGCAGGGCCCCGGTGGTGTGCGCATCGTACCGGCTGCCTCGGGCACGCAGAGCATGGTGCACCTGGCCCCGGCCC AGCATGCCGGGCTGATCCAGGCGTTCAGCGAAATTGGCGACAACCTCGACGTGCTGGTGATCGACACCGCGGCGGGTATCGGTGATTCGGTGGTCAGCTT
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRQAMKLVRDELGADAAIIGNRRIAGGVELTAALDYKLSALAPRVPNAELEEELRKTHTRIATAQAELDHRQDSSDNNRQLFAGQSLTAA EPLVEPHIDAPEAAAPAPASAPVDPRLFDAMRSELSGLRELLEVQLGSLAWNQLQGSKPQQATVWRRLQRIGLSGPIARELLDLTAEIDEPRQAWRMLLA HLARMIEIPEVEPIEEGGVIAMVGPAGMGKTTTLAKLAARYVLKYGAQNLALVSMDSFRIGAQEQLKTLGRILNVPVTYVDPGQSLAAALEPLLRKRVVL IDTAGLQASDPALRMQLETLAGRGIAAKNYLVLATTSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGDVLSLAISHELPVAYLTDGPRIPDDLHLPRG HQLVTRAVNVQQQDEPSEEAMADMFADLYHNPRRAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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