Strain | Pseudomonas putida strain DLL-E4, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CAGCTGGATGACGCCCTCGCTGCACAGCCGCTTGAGAACTTCGCGCACGCTGAGGAACGACAGCGGGATATCCAGCTGTTCCAGCTGCGCGTGCACGCCG CGCACGCCAATGCTGCGGCCATTGCGGTCGGCGGCGTGCAAGGCATCGATGACCTTGAGGCGGATCAGGCTGGTACGCAGGCCGAAACTGCGCAAAAGCT CGCGGATCTGTTCGTTGCCGATGCGTTCGTCAGCAAAAACGTCCTGTTCCCTGGGCGCTTTGCCTGGGACGCGCCCAGCCTGGATCGAGGGTTGCGGGTT GTACATGTGAATGCTCCTTTTCGTGGACGAACCCGAAATTTGGGTGCCTCACTTACTAGGACGAATGAGAACGGAAAAACTGCAGCCCACTCGCAAAAAA AATCTGGTTCTGTTCAAGACGTTCCATTGCCTTGTAATACGTAAAATTTTCATTTGGCCATTCGTCTGATCGGGATGATCCCCGAAGCCGAGGAGTGCCT
|
|
DNA Sequence for Gene |
>DW66_RS16480
GTGTTTCCACTTTCCCGTCCCATGACTTGCGCTGGCCTGGCCGCCGCCCTGGTAGCCTTCAGCGTTGGCGCAGTGCCGGTGCAGTCCGCCGCAGCCGATG CCAGTGCGCAGATTCGCCGAACCACTTACGGTGTGCCGCACATCGTGGCCAAGGACGAGCGCGGCCTGGGTTATGGCATCGGCTACGCCTACGCCCAGGA CAACTTGTGCCTGCTGGCCAATGAAGTGCTGACCGTGAGTGGCGAGCGCTCACGCTACTTCGGTGCCAAGGGCAAGACCCTTGAGCAGCGTGACAATCTG GCCAGCGACGTATTCTTCACCTGGCTCAACACTCCGGCGGCAGTCGATGCGTTCTTGCAGGCGCAGCCGGCACCGGTACGGGCGCTGCTGGCAGGTTATG CCAGCGGGTTCAACCGGGCGCTGGCCGAGCGCCGCAGCCAAGGGTTGCCCGCCGAATGTGGCACCGGCGAGTGGCTGCGGCCGATAAGCAGCGAGGACCT GGTCAGGCTGACCCGTCGGCTGCTCGCCGAAGGCGGTGTCGGGCAGTTCGTCGAAGCGCTGGCCGGGGCGCAACCGCCAATGCAGGCCAGCCAGCCGGCG CCGGCAGGGTTTGCCGCGGCGCTGGCCAGGCAACAGCGTTTTGCCACGGAGCGCGGTAGCAATGCGGTGGCTGTCGGGGCCCGGCGTTCGGCCAATGGCC GTGGTCTGTTGCTGGCCAACCCGCACTTCCCGTGGATGGGGGGCATGCGTTTCTATCAGATGCAACTGACCATTCCCGGCCAGCTCGATGTGATGGGGGC GGCATTGCCGGGCCTGCCGGTGGTCAACATCGGCTTCAACCAGCATCTGGCCTGGACGCACACCGTCGATACGTCGAATCACTTCACCCTGTACCGCCTG CAACTCGACCCCAAGGACCCGACCCGCTACCTGCTCGATGGCAAGTCGCTGCCGTTGGCCCGGCAAACCGTCAGTGTTGCGGTAAAGGCCGAGGATGGCA GCCTGAGCCAGGTGCAGCGCCAGGTCTACAGCTCGCAATTCGGCCCGGTGGTGCAATGGCCGGGGCGCCTGGACTGGGATGCACATGCTGCCTACAGCCT GCGCGACGCCAACCTCGAGAACACCCGGGTGTTGCAGCAGTGGTACCAGATCAACCATGCAGACAGCCTGGTGGCGTTGAAACGCTCGATCGAACAGCTG CAGGGCATCCCCTGGGTCAACACACTGTCGGTGGACCAGGCTGGCAAGGCCCTGTACCTGAACCAGTCAGTGGTGCCTTATGTGGATCAGCAACTGCTGA GCACGTGCAGCAACCCGCAGGCACAAGGGCGCCTGGTAGTACTGGATGGCTCCCGCAGCGCGTGCCAGTGGAAGGTCGATGCGCAGGCCGCACAGCCGGG GATTTTCCCTGCGCGGCTTCTGCCGAGCCTGGAACGCGAAGATTTCGTGCAGAACTCCAACGACCCGGCCTGGATGGCCAACCCGGCGCAGCCGCTGACC GGTTATTCGCCGCTGGTCAGCCGCAGTGACCAGCCGCTGGGCATGCGTGGCCGCTTTGCCCTGCAACGCCTGCAGGGTACGGCCCGCCTGGGCGCTGACG ACCTGCAGCGCATGGTGACCGATGACGAGGTCTACCTGGCCAGCCTGCTACTGCCTGACCTGCTGCAGTGGTGCAAGGGCGCCGACGCGGATGTGCGGGC CGTATGCAGCAGCCTGGCGGCCTGGAATGGCAAGGCTGACCTGGACAGTGGCATTGGGCTGATACATTTCCAGAACCTGTACGATGCCCTGGCCGAGCAC CCGCAAAGCTGGCGGGTGGCCTTTGACCCTGCCGATCCGCAGCATACCCCGCGCGGGTTGGCGGTCGAGCAGGCGGCCGTGCGCAAGCTGTTGCATCAGG CCGCATTGGCGTCGCTCGAGCAGGTGCGTGACAGCGGTATGGCAGGGGAGGTGCGTTGGGGGCAGGTGCAACAGGCGGGCGATGGTACGCCGGTGCCGGG TGGCCCGCAGGCGTTGGGCGTGTACAACGCGATCTACAGCGTGCCGCATGGGCAGGGCAAGCGGTTGGTGGTCAGTGGTACCAGCTACCTGCAACTGGTC AGTTTTACCGACCAGGGGCCAGAGGCCCGTGGGCTGCTGGCGTTTTCCCAGTCCAGTGAAGCGGCTTCGGTGCATGCCGGTGATCAGACCAAGGCGTTTG CAGCCGGGCAACTGGCGGTGATTCCGTTTACCGAGGCGCAGATCAAGGCTGACCCGGAGTACCGGGAACTGGTGATCAGTGAGGGGGACAAGGGGGCGGT GGTCAGCCGGCCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGTATAAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCCACAGGTGCTGCACCAGGGCTGCAAGCAGCACGATACCTGTGGGAGCGGGTTTACCCG CGAAGAAGGCGACTCGGTTGGTCAGGAAAACTCGAACGGCGCCAGCTGAAAGCCTTGCTCGTCAACCTGCAAGGCCCAGCCACGGCGGTCCCAGTCGCCC AGCACGATACGCCGTGCCGGTTGCCCATCGACCACCAGCTTGTGTATCGCCGGCCGATGGGTATGCCCATGCACCAAGGTACGTACACCATGCGCTGCCA TTACCTTCGGCACTTCCTCTGGCGTGACATCGACGATCTCGGTGGACTTCATCCGCGTTTGCGAGCGGCTTTCGCTGCGTAGCTTGCGTGCCAGCTTGTA GCGGGCCGACAGCGGCAGGTGCCGCAACACCCACAGGCTCAGCGGGTTGCGCAGCAAGCGGCGCATTTTCATGTAGGCCAGGTCGCGGGTGCACAAGGTA
|
|
Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MFPLSRPMTCAGLAAALVAFSVGAVPVQSAAADASAQIRRTTYGVPHIVAKDERGLGYGIGYAYAQDNLCLLANEVLTVSGERSRYFGAKGKTLEQRDNL ASDVFFTWLNTPAAVDAFLQAQPAPVRALLAGYASGFNRALAERRSQGLPAECGTGEWLRPISSEDLVRLTRRLLAEGGVGQFVEALAGAQPPMQASQPA PAGFAAALARQQRFATERGSNAVAVGARRSANGRGLLLANPHFPWMGGMRFYQMQLTIPGQLDVMGAALPGLPVVNIGFNQHLAWTHTVDTSNHFTLYRL QLDPKDPTRYLLDGKSLPLARQTVSVAVKAEDGSLSQVQRQVYSSQFGPVVQWPGRLDWDAHAAYSLRDANLENTRVLQQWYQINHADSLVALKRSIEQL QGIPWVNTLSVDQAGKALYLNQSVVPYVDQQLLSTCSNPQAQGRLVVLDGSRSACQWKVDAQAAQPGIFPARLLPSLEREDFVQNSNDPAWMANPAQPLT GYSPLVSRSDQPLGMRGRFALQRLQGTARLGADDLQRMVTDDEVYLASLLLPDLLQWCKGADADVRAVCSSLAAWNGKADLDSGIGLIHFQNLYDALAEH PQSWRVAFDPADPQHTPRGLAVEQAAVRKLLHQAALASLEQVRDSGMAGEVRWGQVQQAGDGTPVPGGPQALGVYNAIYSVPHGQGKRLVVSGTSYLQLV SFTDQGPEARGLLAFSQSSEAASVHAGDQTKAFAAGQLAVIPFTEAQIKADPEYRELVISEGDKGAVVSRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|