Pseudomonas putida DLL-E4, DW66_RS14200 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain DLL-E4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CACGTTACCACGCGCCAGCGAAGTGAAGGCGATGGCCGACTGCACGGTAGCCGGCAAGGCACACAGGTAGAGCACGCCCAGGTAAAGTTCGTTGCCCACC AGCGGCACGAACAGTGGCTTGAACGCCAGGCCCAGCAGCGGGAACAGCACGAAGGTGCAGGAGAACACCAGCAAGTGCAGGCGCCAGTGCCCCGCTCCGG CAATGATCGCCTCGCGCGACAGCTTGGCGCCGTGCAGGAAGAACAGCAGGCCGATGGCCAGGTTGGTCAGCCAACCAAAATACACTGCGCCGTCGCCCGA GCAAGGCAGCACGGTGGCAATCAGCACCACCCCGAGCAAGGCCAGGGTGAAATTGTCGAATAACATGCGCAAATACTTCATCACAGTTTCCGTCTTGTCA TTGTGCAAGGGCAGACGATAAGGTCTTCGGCTTTTCGCCGCTAACGCCGGAACCCCCACCGGTGTCGCTCAACGGACACGCTCCAGCACAGGACCCGCTC
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| DNA Sequence for Gene |
>DW66_RS14200
|ampC
ATGCCCCTCTCCCGCCTGGCTGCACTTGCAGCCGCCATCACTCTCAACCTGGGCTACAGTGCCGCCCAGGCCGACGACCAGTTGCAGGCCAAGGTCGACC AGATCATCCGCCCGCTGATGCAGGAGCAAGGCATCACCGGCATGGCCGTGGCCATCTATGCTCGCAACCACGCGCACTACTTCAGCTATGGCGTGGCCAG CAAGGCCGACAATGTGCCGGTCAGCCGCGACACGCTGTTCGAGATCGGTTCGCTGAGCAAGACCTACACCGCCACCCTGGCCGCATTGGCCAGTGCCGAA GGCAAGCTGGACCTCGATGCCCCGGCCAAGCGCTATCACCCGGCCCTTGCCGGGGCCCCCATCGGCGACGCAAGCGTGCTGGAGCTGGGCGCCTATAGTG CCGACTGCCTACCGTTGCAGTTCCCGGATGCGGTGCAGACGCCGCAGCAGGTGGTCGATTTCTTCCGTCACTGGCAGCCCCGCGCCAAACCCGGCACCCA GCGCTGCTACTCGAACCCCAGCCTGGGCTTGTTCGGTGACCTGGCCGCCCGCGCGCAGCATCAGCCGTTTTCCACGCTGATGAGCGAGGGCCTGCTGAAA CAGATGGGCCTGCGAAACACCTATCTGCAGGTCCCGGCCAGCGCCCAGGGGTTGTATGCCCAAGGTTACGACAGTGCCGACAAGCCGGTGCGTGTCGGCC CCGGCCCTTACGCCGACGAAGCCTACGGCATCAAGACCAGCGCCAGCGACCTGCTGCGCTATGTGCGCCTGCACATGCAGCCGGAGGGGCTGCCACCGGC GCTGGCACAAGCCACCGCCATCACTCAGCGGGGCTACTTCCAGGTCGGCGCCATGACCCAGGGCCTGGGCTGGGAGCGTTACCCCTACCCGGTCACGCTG GCCACACTGGTCGATGGCAACGGCCCGCAGCTTATCCGTGAACCGCAGGCAACCACACGCCTGCAACCAGCCCTGCCGCCGCTGCCGGCAGCCTGGTACA ACAAGACCGGCTCGACCAATGGATTCGGCGCCTACGCCGCGTTCGTGCCCGCCGAACAACTGGCCGTGGTGTTGCTGGCCAACCGAAACTACCCGAACGA AGCCCGGGTGCGCGCAGCCTTCGACATTCTCTCCGGGCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCGGGCAGCGATTGTCGAACAAAACGACACAATGTAGTGAGGAAAAATATTCACTACAAAATGGTTGACGCCGTTCATCGCCCTTGGGCATGATGAAGC CGTCTCCCTGATCGGGAGCGGTGGCAAGGGTGTTCCAGACGGCCTGCGCGGTAACGCAGGCCGTCCGTGGAGAGGGAAACTGTCCAAAAGGCAGCGTGAG AAAGCCCCTGTTGCGATGCTGCTGTAGCAGCCTTGGTAGTGCGCTACACCGTAGTAGCGCCAACTGTGAAAAATCACCTACGAATGGGTAATGGGGGCTT TATGATGAACTTGAACAACAATCCGACTATCGACCAATTGGCCCAGCTGTTCGCCGTACGCAAGGACAGCCTTGACGACCATCTGCTGTGGGTAAGCCAG ACCGGTGAAGTGCGCCTCGACCGCCTGCCACCGAACACCGTCGAAGATGAATTCGAAGAGCACCTGCCCAGCATGCGTGCCCGCTTCAAGGTCTACCGCC
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| Amino Acid Sequence |
>class C beta-lactamase
MPLSRLAALAAAITLNLGYSAAQADDQLQAKVDQIIRPLMQEQGITGMAVAIYARNHAHYFSYGVASKADNVPVSRDTLFEIGSLSKTYTATLAALASAE GKLDLDAPAKRYHPALAGAPIGDASVLELGAYSADCLPLQFPDAVQTPQQVVDFFRHWQPRAKPGTQRCYSNPSLGLFGDLAARAQHQPFSTLMSEGLLK QMGLRNTYLQVPASAQGLYAQGYDSADKPVRVGPGPYADEAYGIKTSASDLLRYVRLHMQPEGLPPALAQATAITQRGYFQVGAMTQGLGWERYPYPVTL ATLVDGNGPQLIREPQATTRLQPALPPLPAAWYNKTGSTNGFGAYAAFVPAEQLAVVLLANRNYPNEARVRAAFDILSGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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