Pseudomonas putida DLL-E4, DW66_RS11925
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain DLL-E4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGGCCGACCGCCTGCGCGCGCTGGACTACGAAGTGACCCATACGGTGATCCGCTCGCCGATCGACGGCATGGTCCAGGCCCTGAGCATCGCCACGGTA GGCGGCATCATCCAGCCAGCGGCCAAGATCATGGAGGTGGTGCCGCTGGACCAGCCATTGCAGGTGGACGCGATGATCCCGGTACAGGCCATCGACAAGA TGGTGCCGGGCCTGGACGTGGACCTGGCCTTCCCGGCCTTCAACCATGCGAAGACGCCGAATATCCCGGGGCGGGTCAAGACCATCTCTGCCGACCGCCT GATGGACGAAGAAAGCAAGCAGCCGTACTACCTGGCCCAGGTGGAAGTGACGCAGGACGGCATGGCCCTGCTGGGCAGCAACCATATCCGCCCCGGGATG CCGGCCACCGTCACCATCAAGACCGGCGAGCGCAACCTGCTCAGCTACCTGCTCAAGCCGATGCTCGAACGCGTGGACGCCTCGTTCAAGGAGCAATGAC
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| DNA Sequence for Gene |
>DW66_RS11925
ATGAATCGCCCGTGCCTGATGTTGTGCCTGTTGGGGTTGTCTGTACAGGCCAGTGCCATGGACCTGAAGCAAGCCTGGGACCTGCTGCAATACCAGGGCC CGATCTACCGCGCCGCGGTGCACGAGAAAGAAGCCGGCAGCGAAAACCGCGCCATCGGCCAGGCCGGCCTGCTGCCGCAGATCAACGCTGTGGGTTACTT CAACAAGGTCAATGGCAGCCAGCGTCAGAGTGGACGGGACAACGACCTGGACTATGACTCCAAGGGCGCCAACGTGCGTTTGCGTCAACCGCTGTTCAAC AAGCAGAAGATGGCCGAATACCATCAGGGCCAGCAACGTGCCGACTACAGCGTGGCGGTGTTCGATGCCAAGACCCAGGACGCTGCGGTGCGCCTGGCCG ACGCCTACTTCGACGTGCTGCTGGCCAGCGAAACCATCACCCTGGCCAAGGCCAAGCTAAATGCCTTCGAAGAGCAGCTGGCGTCGGCAAAGCGGCGCAT GGAGCTGGGCGCCGGCACCATCACCGACATCGACGAGTCGATAGCCCGTCGCGACCTGGCCGAGGCCGACCTGATCGAGGCCCAGGACAACCTGGTCAAC GCCCGCCGCAAGCTGGAGGAATACATTGGTGAAACGCCGGAGTCGCTGACCACCTTGCAGCCGGGCTTCAACACACCGCCGCTGATGCCGGGCAACCTGC AGGACTGGCTGGTCAAGGCCCAGGCCGACAGCCCGTTGATCCATGCGCGCCGGCACAACTACGAGCTGGCCGAAGAAGAAGTGAAACGCGCCCGCGCCGG GCACTGGCCGACCCTGGATTTCGTGGCGGGCTATACCGCCGGCAGCAGCCAGTCGATCTCCGAACTGAACCAGCGCAACCACTACAGCTCGATCGGGCTG GAGCTGAACATTCCGCTATACAGCGGCGGCAGCACCAGCGCCCTCACCCGCCAGGCCAGCGCCAACAGTTCCAAGGCACTGGATGAACTGGATGCCACAC GCCAGGAAGTGATCTCCGACACCACCCGCGAGTACCGCGGCGTACAGAGTGGCGCCTTGCGCATCCAGGCGCTGGAAAAGGCCGTGGCATCCAACGAACG CTCGCTGCGTTCGGCCCGCAAGGGCTTCAGGGAGGGCGGCACCAGCACCAACTCGGATGTGCTCAATGCCGAGGAATTGCTTTTTGACGCCCGGCATGAC CTGTTCGAGGCGAAGCTGAACTACCTGATGTCGCGGCTGCGCCTGGCATCGTCGGTGGGCAGCCTGGGAGATGACGATATCCAGCAGATCAACGATTACC TCGGGCCGGAACTGGTAGTAAGCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTATCGGCGGCCCGCTCCCACAGCGGCGCCTACCGCATTTTGTTCCATTTCAGGCTATGATCGGTGACCCCGCCGCGGACGCCATGCCCCATGCCCGTAG ACCTGCAAGCGTTATACCCCAGGCTGATCCACCTGATGCTGGACACGGTGTTCGTGGTCGACAGGGGCAACCAGATCATTTTCGTCAGCGATGCCTGCGA GGCGCTGCTGGGCTACCAGGCCTGCGAGCTGATCGGCACCCCGATCACCGACTACATGCACCCTGACGACCTGGCGATTACCCGCGCGTCGATCGTACGG GTGATGAACGGCCAACCCCATTACGATTTCCGTAACCGCTACATCCGCAAGGATGGAAGTATCGTGCATATCCTGTGGTCGGCCTCCTGGTCCGATGAGG CCAATGCCCGCATTGGTGTAGCGCGGGATATCACCGCCCAACACCAGGCCGAGGAAGAATTGCGTTTCCTGGCCCACCATGACCCGCTGACTCGCCTGGC
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| Amino Acid Sequence |
>channel protein TolC
MNRPCLMLCLLGLSVQASAMDLKQAWDLLQYQGPIYRAAVHEKEAGSENRAIGQAGLLPQINAVGYFNKVNGSQRQSGRDNDLDYDSKGANVRLRQPLFN KQKMAEYHQGQQRADYSVAVFDAKTQDAAVRLADAYFDVLLASETITLAKAKLNAFEEQLASAKRRMELGAGTITDIDESIARRDLAEADLIEAQDNLVN ARRKLEEYIGETPESLTTLQPGFNTPPLMPGNLQDWLVKAQADSPLIHARRHNYELAEEEVKRARAGHWPTLDFVAGYTAGSSQSISELNQRNHYSSIGL ELNIPLYSGGSTSALTRQASANSSKALDELDATRQEVISDTTREYRGVQSGALRIQALEKAVASNERSLRSARKGFREGGTSTNSDVLNAEELLFDARHD LFEAKLNYLMSRLRLASSVGSLGDDDIQQINDYLGPELVVSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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