Pseudomonas putida DLL-E4, DW66_RS10520
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida strain DLL-E4, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGAGCAGTCGCCGCTGTGCTGGTTCGCGGGCTACCACGGCCTGCCGACCAAAGCCTTCGTCGGCAAGTACTACCTCAGTGGCGACACCGTCGAACTGAA CCAGGACGGCAGCATCAGCTTCGTCGGCCGCAGCGACGATGTGATCACCACCTCCGGCTACCGGGTCGGCCCGTTCGACGTCGAGAGTGCACTGATCGAG CACCCAGCGGTGATCGAAGCGGCGGTGATCGGCAAACCGGACCCGGAGCGCACCGAACTGATCAAGGCCTTCGTGGTATTGGCCAGCGGTTACCAGGGCA GCGCCGAGCTTGAAGAGGCTTTGCGCCAGCACGTGCGCCAGCGCCTGTACGCCCATGCCTACCCAAGGGAAATCGAATTCGTCAGCGAGCTGCCCAAGAC CCCGAGCGGCAAGCTGCAACGCTTCATCCTGCGCAACCAGGAAGTCGCCAAACAACAAGCGCAACAGGCCACCCCTGCCAGCGCCTGAAAGGAACCGATC
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| DNA Sequence for Gene |
>DW66_RS10520
ATGCAGATAGCCAACAAACACTTCATCGTCAGCGGCGCCGCCTCCGGGCTGGGCGCTGCCACCGCGCAGATGCTGGTCGAGGCCGGCGCCAAGGTCATGC TGGTCGACCTCAATGCCCAGGCCGTTGAAGCCAAGGCTCGCGAGCTGGGCGAAAACGCCCGTTTCGCGGTAGCCGACATCAGCGACGAGCAGGCCGCCCA GGCGGCGGTCGATGCGGCCGTCAGCGCCTTTGGCAGCCTGCACGGGCTGGTCAACTGCGCCGGCATCGTCGGTGCCGAGAAAGTGCTGGGCAAACAGGGC CCGCATGGCCTTGCCAGCTTTGCCAAGGTCATCAACGTCAACCTGATCGGCAGCTTCAACCTGCTGCGCCTGGCCGCCGCGGCCATGGCCGAAGGGGCTG CCGATGAGGGGGGGGAGCGCGGGGTGATCATCAACACCGCCTCCATCGCCGCCTATGACGGCCAGATCGGCCAGGCGGCCTACGCTGCTTCCAAGGGCGC CATCGCCAGCCTGACCCTGCCGACCGCCCGCGAACTGGCGCGCTTCGGCATCCGTGTGATGACCATTGCCCCGGGCATCTTCGAAACGCCGATGATGGCC GGCATGACCGAGGAAGTACGCGCCTCGCTGGCCGCCGGCGTGCCTTTCCCACCGCGCCTGGGGCGCCCGCAGGAATATGCCGCGCTGGCCCGCCACATCA TCGAGAACAGCATGCTCAACGGCGAGGTTATCCGCCTCGACGGCGCACTGCGCATGGCTGCCAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAGAGCGAACATGACCCTCGCCAATGACCCGATCGTTATCGTCAGCGCCGTGCGCACGCCCATGGGCGGCCTGCAGGGCGACCTCAAGAGCCTGACCGC GCCGCAGCTGGGCAGCGCCGCCATCCGTGGTGCCGTGGAGCGTGCTGGCATCGATGCTGCCAGTGTCGAGCAGGTGCTGTTCGGCTGCGTGCTGCCGGCA GGCCAAGGCCAGGCACCGGCGCGCCAGGCCGCGCTGGGCGCCGGGCTGGACAAGCACACCACCTGCACCACCCTGAACAAGATGTGCGGTTCGGGCATGC AGGCGGCGATCATGGCCCATGACCTGCTGCTGGCCGGCACTGCCGATGTGGTGGTGGCCGGTGGCATGGAAAGCATGACCAACGCCCCGTACCTGCTGGA CAAGGCCCGTGGCGGCTACCGCATGGGCCACGGCAGAATCATCGACCACATGTTCATGGACGGCCTGGAAGACGCCTACGACAAGGGCCGCCTGATGGGC
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| Amino Acid Sequence |
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MQIANKHFIVSGAASGLGAATAQMLVEAGAKVMLVDLNAQAVEAKARELGENARFAVADISDEQAAQAAVDAAVSAFGSLHGLVNCAGIVGAEKVLGKQG PHGLASFAKVINVNLIGSFNLLRLAAAAMAEGAADEGGERGVIINTASIAAYDGQIGQAAYAASKGAIASLTLPTARELARFGIRVMTIAPGIFETPMMA GMTEEVRASLAAGVPFPPRLGRPQEYAALARHIIENSMLNGEVIRLDGALRMAAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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